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sw_7_scaffold_1507

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1507_1
unknown

Not on your lists

comp(2..130)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_7_scaffold_1507_2
unknown

Not on your lists

comp(130..765)
DNA (636bp) protein (212aa)

This feature has no annotations

sw_7_scaffold_1507_3
unknown

Not on your lists

comp(762..1106)
DNA (345bp) protein (115aa)

This feature has no annotations

sw_7_scaffold_1507_4
unknown

Not on your lists

1264..1602
DNA (339bp) protein (113aa)

This feature has no annotations

sw_7_scaffold_1507_trna_1
unknown

Not on your lists

1645..1719
DNA (75bp)
transferRNA
sw_7_scaffold_1507_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1867..2808)
DNA (942bp) protein (314aa)
Phosphotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCK6_9EURY
Phosphotransferase {ECO:0000313|EMBL:EMA55561.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
fructosamine-3-kinase
sw_7_scaffold_1507_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2921..4072
DNA (1152bp) protein (384aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUP9_9EURY
sw_7_scaffold_1507_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4069..4938
DNA (870bp) protein (290aa)
sucD; succinate--CoA ligase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L936_HALJP
sw_7_scaffold_1507_8
unknown

Not on your lists

comp(5324..5617)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_7_scaffold_1507_9
unknown

Not on your lists

5744..5965
DNA (222bp) protein (74aa)

This feature has no annotations

sw_7_scaffold_1507_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6044..6610
DNA (567bp) protein (189aa)
Peroxidase-like protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C8N2_9EURY
peroxidase-like protein
Peroxidase-like protein {ECO:0000313|EMBL:ELZ19580.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_7_scaffold_1507_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6638..6838
DNA (201bp) protein (67aa)
Heavy metal transport/detoxification protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWV0_9EURY
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AGN00726.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarch
sw_7_scaffold_1507_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6935..7651
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Halarchaeum acidiphilum RepID=U3A3B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52144.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
recombinase A
sw_7_scaffold_1507_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7667..9205)
DNA (1539bp) protein (513aa)
Deoxyribodipyrimidine photolyase-related protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E6B7_9EURY
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:ERJ07748.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
phr2; cryptochrome/photolyase
sw_7_scaffold_1507_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9286..10602)
DNA (1317bp) protein (439aa)
Chaperone protein DnaJ n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LKA6_9EURY
Chaperone protein DnaJ {ECO:0000313|EMBL:EMA32445.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
sw_7_scaffold_1507_15
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10697..12043)
DNA (1347bp) protein (449aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1227454 species="Archaea; Euryarchaeota; Halo
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LCR2_9EURY
sw_7_scaffold_1507_16
unknown

Not on your lists

comp(12167..12406)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_7_scaffold_1507_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12558..12677)
DNA (120bp) protein (40aa)
PilT protein domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWN0_9EURY
PilT protein domain protein {ECO:0000313|EMBL:EFW91126.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalo
twitching motility protein PilT
sw_7_scaffold_1507_18
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12641..12952)
DNA (312bp) protein (104aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWG0_NATMM
PilT protein domain-containing protein
sw_7_scaffold_1507_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12949..13188)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Haloquadratum walsbyi RepID=Q18EN0_HALWD
hypothetical protein
DUF217 family protein {ECO:0000313|EMBL:CAJ53593.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain D
sw_7_scaffold_1507_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13231..13998)
DNA (768bp) protein (256aa)
probable oxidoreductase (aldo-keto reductase family protein) (EC:1.1.1.-)
Aldo/keto reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D4R4_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ29843.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
sw_7_scaffold_1507_21
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14089..14886)
DNA (798bp) protein (266aa)
GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Sali
GTP cyclohydrolase III n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WA10_9EURY
sw_7_scaffold_1507_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14996..16501)
DNA (1506bp) protein (502aa)
Cell surface glycoprotein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F9Y1_9EURY
Cell surface glycoprotein {ECO:0000313|EMBL:ERJ06870.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SAR
sw_7_scaffold_1507_23
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16498..16650)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0B5_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62812.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_7_scaffold_1507_24
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16855..17076
DNA (222bp) protein (74aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDP3_9EURY
Periplasmic protein involved in polysaccharide export {ECO:0000313|EMBL:ELZ94900.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Hal
Wza; periplasmic protein involved in polysaccharide export
sw_7_scaffold_1507_25
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17469..17702)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VZ55_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY42460.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
sw_7_scaffold_1507_26
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17815..18624)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K5H4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39348.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_1507_27
unknown

Not on your lists

comp(18628..18891)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_7_scaffold_1507_28
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19165..19755)
DNA (591bp) protein (197aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKF8_9EURY
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
Displaying 29 items

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