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sw_7_scaffold_2409

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2409_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1143)
DNA (1143bp) protein (381aa)
Glutamine synthetase; Short=GS;; EC=6.3.1.2;; Glutamate--ammonia ligase; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobact
Glutamine synthetase n=2 Tax=Halobacterium salinarum RepID=GLNA_HALSA
glnA; hypothetical protein
sw_7_scaffold_2409_2
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1272..1730
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D789_HALXS
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEH36656.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensi
sw_7_scaffold_2409_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1830..3491)
DNA (1662bp) protein (554aa)
Thermosome n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D799_HALXS
thermosome
Thermosome {ECO:0000313|EMBL:AEH36667.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14
sw_7_scaffold_2409_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3665..4330)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7U8_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH36679.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_7_scaffold_2409_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4330..4734)
DNA (405bp) protein (135aa)
Universal stress protein UspA-like protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JS82_NATP1
UspA domain protein {ECO:0000313|EMBL:EFW90730.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
universal stress protein UspA-like protein
sw_7_scaffold_2409_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4865..6598
DNA (1734bp) protein (578aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQP1_HALUD
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV10500.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source=
sw_7_scaffold_2409_trna_1
unknown

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comp(6580..6664)
DNA (85bp)
transferRNA
sw_7_scaffold_2409_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6693..6989)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK45_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35241.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_7_scaffold_2409_8
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6986..7366)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP, putative n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0ICG4_HALRX
endoribonuclease L-PSP, putative
Endoribonuclease L-PSP, putative {ECO:0000313|EMBL:AGB17255.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DS
sw_7_scaffold_2409_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7411..8637)
DNA (1227bp) protein (409aa)
l-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6M7_9EURY
L-threonine ammonia-lyase {ECO:0000313|EMBL:ELZ29814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
sw_7_scaffold_2409_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8938..10575)
DNA (1638bp) protein (546aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:EJN59560.1}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
citZ; citrate (si)-synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halogranum salarium B-1 RepID=J2ZFU1_9EURY
sw_7_scaffold_2409_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11152..11616)
DNA (465bp) protein (155aa)
Deoxyribonuclease/rho motif-related TRAM n=2 Tax=Halobacteriaceae RepID=L0JHL1_NATP1
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:ELY79297.1}; SAM-dependent methyltransferase, tRNA(Uracil-5)-methyltransferase {ECO:0000313|EMBL:AGB30323.1}; TaxID=797303 species="Archaea;
sw_7_scaffold_2409_12
unknown

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11921..12325
DNA (405bp) protein (135aa)

This feature has no annotations

sw_7_scaffold_2409_13
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12329..12451)
DNA (123bp) protein (41aa)
Pyruvate formate-lyase activating-like protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MXV9_9EURY
hypothetical protein
Radical SAM protein {ECO:0000313|EMBL:EMA61260.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;"
Displaying 14 items

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