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sw_7_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_463_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2..931)
DNA (930bp) protein (310aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=797114 species="Archaea; Euryarchae
Valine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJT0_9EURY
valyl-tRNA synthetase
sw_7_scaffold_463_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1187..2110)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KIA5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA20638.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_7_scaffold_463_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2528..3838
DNA (1311bp) protein (437aa)
Regulatory protein ArsR n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1G9_9EURY
Regulatory protein ArsR {ECO:0000313|EMBL:ELY67944.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
putative transcriptional regulator
sw_7_scaffold_463_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3935..5437
DNA (1503bp) protein (501aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1210908 species="Archaea; Euryarc
DNA primase DnaG n=1 Tax=Halogranum salarium B-1 RepID=J3JFP2_9EURY
DNA primase
sw_7_scaffold_463_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5456..5710)
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JI35_NATP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB30508.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY77278.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialba
sw_7_scaffold_463_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5707..6669)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTU3_9EURY
Putative membrane protein {ECO:0000313|EMBL:ERG93415.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07H
hypothetical protein
sw_7_scaffold_463_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6915..7223
DNA (309bp) protein (103aa)
Undecaprenyl diphosphate synthase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1M3_9EURY
Undecaprenyl diphosphate synthase {ECO:0000313|EMBL:ELY67940.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM
UDP diphosphate synthase
sw_7_scaffold_463_8
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7246..8148)
DNA (903bp) protein (301aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFQ7_9EURY
sw_7_scaffold_463_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8251..8652
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA94_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14616.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_463_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8780..10150
DNA (1371bp) protein (457aa)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NNH0_HALBP
sw_7_scaffold_463_11
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10163..11008)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZT91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY88398.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_7_scaffold_463_12
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11093..11743
DNA (651bp) protein (217aa)
Haloacid dehalogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CI96_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:ELZ22077.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563
phosphatase
sw_7_scaffold_463_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11788..12207
DNA (420bp) protein (140aa)
Molecular chaperone n=1 Tax=Halogranum salarium B-1 RepID=J3EVQ7_9EURY
Molecular chaperone {ECO:0000313|EMBL:EJN58752.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
molecular chaperone
sw_7_scaffold_463_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12212..14407
DNA (2196bp) protein (732aa)
ABC-1 domain-containing protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IFT5_9EURY
Membrane protein {ECO:0000313|EMBL:AHG04545.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ABC-1 domain-containing protein
sw_7_scaffold_463_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14461..14835
DNA (375bp) protein (125aa)
Translation initiation factor 5A n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYR1_9EURY
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
translation initiation factor eIF-5A
sw_7_scaffold_463_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14835..15695
DNA (861bp) protein (287aa)
Agmatinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSV4_9EURY
Agmatinase {ECO:0000313|EMBL:EMA36637.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
agmatinase
sw_7_scaffold_463_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15749..16516
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=797303 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFY5_NATP1
dinuclear metal center protein, YbgI/SA1388 family
sw_7_scaffold_463_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16559..17641
DNA (1083bp) protein (361aa)
Putative deoxyhypusine synthase {ECO:0000313|EMBL:EFW93384.1}; EC=2.5.1.46 {ECO:0000313|EMBL:EFW93384.1};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
deoxyhypusine synthase (EC:2.5.1.46)
Putative deoxyhypusine synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQX0_9EURY
sw_7_scaffold_463_19
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17966..18883
DNA (918bp) protein (306aa)
nas1; nicotianamine synthase (EC:2.5.1.43)
Nicotianamine synthase {ECO:0000313|EMBL:AEV81172.1}; EC=2.5.1.43 {ECO:0000313|EMBL:AEV81172.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;"
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003713769
sw_7_scaffold_463_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18822..19577)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PRT0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG95056.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_7_scaffold_463_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20103..20723
DNA (621bp) protein (207aa)
gpmB; phosphoglycerate mutase (EC:5.4.2.1)
Fructose-2,6-bisphosphatase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5W8_9EURY
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EMA41086.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
sw_7_scaffold_463_22
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20720..21247
DNA (528bp) protein (176aa)
Isochorismatase hydrolase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W6I0_9CYAN
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:AFZ15414.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_7_scaffold_463_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21418..21714
DNA (297bp) protein (99aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR36_9EURY
padR1; PadR family transcription regulator
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW92944.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
sw_7_scaffold_463_24
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21819..22463)
DNA (645bp) protein (215aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W363_9EURY
sw_7_scaffold_463_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22523..22945)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSA8_NATM8
hypothetical protein
DUF1119 family protein {ECO:0000313|EMBL:CCQ37238.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_7_scaffold_463_26
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22942..23526)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AEW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY97054.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_7_scaffold_463_27
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23589..23843)
DNA (255bp) protein (85aa)
H/ACA RNA-protein complex component Gar1 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GSF4_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:ESP88026.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="
H/ACA RNA-protein complex protein Gar1
sw_7_scaffold_463_28
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24414..24632)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QSV0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10303.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_463_trna_3
unknown

Not on your lists

comp(24703..24786)
DNA (84bp)
transferRNA
sw_7_scaffold_463_29
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24819..25583)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HW69_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26438.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
Displaying items 1-30 of 71 in total

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