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sw_7_scaffold_1908

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1908_1
unknown

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3..182
DNA (180bp) protein (60aa)

This feature has no annotations

sw_7_scaffold_1908_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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184..1314
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JHT2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30398.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_7_scaffold_1908_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1489..2055
DNA (567bp) protein (189aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=662475 species="Archaea; Euryarch
Leucyl-tRNA synthetase n=2 Tax=Haloarcula RepID=Q5UYH2_HALMA
Suspect SCG annotation. See neighboring gene [sw_7_scaffold_1908_4].
sw_7_scaffold_1908_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2078..4216
DNA (2139bp) protein (713aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1227452 species="Archaea; Euryarc
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA ligase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L175_9EURY
sw_7_scaffold_1908_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4226..4678)
DNA (453bp) protein (151aa)
Bacterioferritin comigratory protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLG2_HALAR
Bacterioferritin comigratory protein {ECO:0000313|EMBL:EMA20989.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula arg
bcp3; bacterioferritin comigratory protein
sw_7_scaffold_1908_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4680..5081)
DNA (402bp) protein (134aa)
Small heat shock protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJB7_HALAR
Small heat shock protein {ECO:0000313|EMBL:EMA20988.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis D
heat-shock protein
sw_7_scaffold_1908_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5145..5579)
DNA (435bp) protein (145aa)
Prephenate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6G4_9EURY
Prephenate dehydratase {ECO:0000313|EMBL:ELZ29754.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
prephenate dehydratase
sw_7_scaffold_1908_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5946..6575)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HRL2_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF25853.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_1908_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6693..8114)
DNA (1422bp) protein (474aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJY0_HALVA
dihydrolipoyl dehydrogenase rbh
sw_7_scaffold_1908_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8281..9018)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RW03_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB61432.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
sw_7_scaffold_1908_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9191..9391
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL13_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA34221.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_7_scaffold_1908_12

Not on your lists

9676..9963
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP10_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07601.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_1908_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9974..11281)
DNA (1308bp) protein (436aa)
Phosphoglucomutase/phosphomannomutase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJ51_HALAR
Phosphoglucomutase/phosphomannomutase {ECO:0000313|EMBL:EMA19845.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ar
phosphoglucomutase
sw_7_scaffold_1908_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11369..11683)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TRT0_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67289.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_7_scaffold_1908_15
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11711..11860)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TRN2_HALHI
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:AJF25554.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_7_scaffold_1908_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11970..12422)
DNA (453bp) protein (151aa)
NCAIR mutase (PurE)-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL07_HALJP
NCAIR mutase (PurE)-like protein {ECO:0000313|EMBL:EMA34216.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonic
purE-2; NCAIR mutase (PurE)-like protein
sw_7_scaffold_1908_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12882..13049
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P233_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47262.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_1908_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13119..13799)
DNA (681bp) protein (227aa)
rpiA; ribose 5-phosphate isomerase A (EC:5.3.1.6) rbh
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1417673 species="Archae
Ribose-5-phosphate isomerase A n=2 Tax=Haloarcula hispanica RepID=G0HTK5_HALHT
sw_7_scaffold_1908_19
unknown

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13858..13950
DNA (93bp) protein (31aa)

This feature has no annotations

sw_7_scaffold_1908_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13988..15304
DNA (1317bp) protein (439aa)
manB4; phosphoglucomutase/phosphomannomutase (EC:5.4.2.2)
Phosphoglucosamine mutase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKS0_HALJP
Phosphoglucosamine mutase {ECO:0000313|EMBL:EMA34212.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
sw_7_scaffold_1908_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15345..15500)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TPN7_HALHI
small CPxCG-related zinc finger protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67296.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_7_scaffold_1908_22
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15565..16047)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J4D0_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA03821.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying 22 items

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