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sw_7_scaffold_2464

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2464_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..902
DNA (900bp) protein (300aa)
nuoCD2; NADH dehydrogenase subunit CD (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase subunit CD (Ubiquinone) n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTX0_HALVA
NADH dehydrogenase subunit CD (Ubiquinone) {ECO:0000313|EMBL:EMA11424.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sw_7_scaffold_2464_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(821..1168)
DNA (348bp) protein (116aa)
Thioesterase superfamily protein n=1 Tax=Halogranum salarium B-1 RepID=J3JI84_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:EJN61654.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative thioesterase
sw_7_scaffold_2464_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1165..1689)
DNA (525bp) protein (175aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KJM5_9EURY
peptide methionine sulfoxide reductase rbh
sw_7_scaffold_2464_4
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1796..2260
DNA (465bp) protein (155aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P8F1_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKF38998.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharov
AsnC family transcriptional regulator
sw_7_scaffold_2464_5
unknown

Not on your lists

comp(2174..2347)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_7_scaffold_2464_6
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2486..3964
DNA (1479bp) protein (493aa)
ndhF; potential NADH-quinone oxidoreductase subunit 5 (EC:1.6.99.5)
Putative NADH-quinone oxidoreductase subunit 5 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JNV3_9EURY
Putative NADH-quinone oxidoreductase subunit 5 {ECO:0000313|EMBL:EMA10686.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
sw_7_scaffold_2464_7
unknown

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comp(3933..4607)
DNA (675bp) protein (225aa)

This feature has no annotations

sw_7_scaffold_2464_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5127..6005
DNA (879bp) protein (293aa)
UPF0753 protein HAH_5136 n=2 Tax=Haloarcula hispanica RepID=G0I048_HALHT
nucleoside-diphosphate-sugar pyrophosphorylase family protein
UPF0753 protein HAH_5136 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
sw_7_scaffold_2464_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6002..6211
DNA (210bp) protein (70aa)
UPF0753 protein C443_01462 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0L1P1_HALAR
UPF0753 protein C443_01462 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
hypothetical protein
sw_7_scaffold_2464_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6358..7266
DNA (909bp) protein (303aa)
pkn1; serine/threonine protein kinase (EC:2.7.11.1) rbh
Serine/threonine protein kinase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KT59_9EURY
Serine/threonine protein kinase {ECO:0000313|EMBL:EMA24103.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
sw_7_scaffold_2464_11
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7590..8504)
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P9Z7_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA66967.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingen
nucleoside-diphosphate-sugar epimerase
sw_7_scaffold_2464_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8604..9596)
DNA (993bp) protein (331aa)
Transcription initiation factor IIB n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKI4_HALJP
transcription initiation factor IIB 2
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_7_scaffold_2464_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9638..10300)
DNA (663bp) protein (221aa)
Transcription regulator n=4 Tax=Haloarcula RepID=G0HYE2_HALHT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:EMA33572.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_7_scaffold_2464_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10554..11144
DNA (591bp) protein (197aa)
50S ribosomal protein L15e n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KD24_HALAR
rpl15E; 50S ribosomal protein L15
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
sw_7_scaffold_2464_15
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11346..11924)
DNA (579bp) protein (193aa)
Brp-like protein-like n=2 Tax=Haloarcula RepID=Q5V0N2_HALMA
beta-carotene 15,15'-monooxygenase
Beta-carotene 15,15'-monooxygenase {ECO:0000313|EMBL:AJF25183.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. C
sw_7_scaffold_2464_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12280..13056)
DNA (777bp) protein (259aa)
Lycopene cyclase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LM83_HALJP
Lycopene cyclase {ECO:0000313|EMBL:EMA33559.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
crtY; lycopene cyclase
sw_7_scaffold_2464_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13073..14044)
DNA (972bp) protein (324aa)
crtB; phytoene synthase (EC:2.5.1.21 2.5.1.32) rbh
Phytoene synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTS7_HALVA
Phytoene synthase {ECO:0000313|EMBL:EMA11379.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715
sw_7_scaffold_2464_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14218..15729)
DNA (1512bp) protein (504aa)
Light-and oxygen-sensing transcription regulator n=2 Tax=Haloarcula RepID=M0K350_9EURY
Light-and oxygen-sensing transcription regulator {ECO:0000313|EMBL:EMA20353.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
boa; light- and oxygen-sensing transcription regulator
sw_7_scaffold_2464_19
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16112..16390
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HQ41_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF25187.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_2464_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16490..17041)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GNC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP86876.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_7_scaffold_2464_21
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17286..18452
DNA (1167bp) protein (389aa)
vacB; ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KG14_HALAR
Ribonuclease R {ECO:0000313|EMBL:EMA19089.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282.;
sw_7_scaffold_2464_22
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18464..18808)
DNA (345bp) protein (115aa)
HxlR family transcriptional regulator n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BE74_9EURY
HxlR family transcriptional regulator
HxlR family transcriptional regulator {ECO:0000313|EMBL:ELZ08787.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena th
sw_7_scaffold_2464_23
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18963..19577)
DNA (615bp) protein (205aa)
Transcription anti-termination factor n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V0M4_HALMA
nusA1; transcription anti-termination factor
Transcription anti-termination factor {ECO:0000313|EMBL:AAV46929.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula mar
Displaying 23 items

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