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sw_7_scaffold_2485

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2485_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..322)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYY5_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA02072.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_2485_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


412..1662
DNA (1251bp) protein (417aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMP5_HALJP
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227453 species="Arc
eif2G; translation initiation factor IF-2 subunit gamma
sw_7_scaffold_2485_3
unknown

Not on your lists

comp(1902..2225)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_7_scaffold_2485_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2352..2549
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L1D6_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
DNA-directed RNA polymerase subunit E''
sw_7_scaffold_2485_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2551..3093
DNA (543bp) protein (181aa)
UPF0218 protein C435_01840 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0J6_9EURY
UPF0218 protein C435_01840 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula california
hypothetical protein
sw_7_scaffold_2485_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3172..3327)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJX3_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09432.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_2485_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3367..4416)
DNA (1050bp) protein (350aa)
RNA methyltransferase n=2 Tax=Haloarcula hispanica RepID=V5TJ88_HALHI
RNA methyltransferase
Putative RNA methylase {ECO:0000313|EMBL:AEM55744.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_7_scaffold_2485_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4667..5227
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU4_HALMD
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
sw_7_scaffold_2485_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5299..5688
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KX11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25811.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_7_scaffold_2485_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5817..6212)
DNA (396bp) protein (132aa)
PilT protein domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDN5_9EURY
PilT protein domain protein {ECO:0000313|EMBL:ELZ19974.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
PilT domain protein
sw_7_scaffold_2485_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6209..6445)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGG4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04613.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_7_scaffold_2485_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6774..7622)
DNA (849bp) protein (283aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZX5_HALMD
sw_7_scaffold_2485_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7741..8076)
DNA (336bp) protein (112aa)
Sugar and other transporter n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KHN8_HALAR
Sugar and other transporter {ECO:0000313|EMBL:EMA20686.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensi
dld; sugar and other transporter
sw_7_scaffold_2485_14
unknown

Not on your lists

8268..8546
DNA (279bp) protein (93aa)

This feature has no annotations

sw_7_scaffold_2485_15
unknown

Not on your lists

8673..8963
DNA (291bp) protein (97aa)

This feature has no annotations

sw_7_scaffold_2485_16
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8960..10258
DNA (1299bp) protein (433aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000255|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=MTAD_HALMA
trzA3; N-ethylammeline chlorohydrolase
sw_7_scaffold_2485_17
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10492..11145
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KKI7_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA20684.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_7_scaffold_2485_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11209..12366
DNA (1158bp) protein (386aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LRY0_HALJP
S-adenosyl-L-homocysteine hydrolase
Displaying 18 items

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