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sw_7_scaffold_2882

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2882_1
unknown

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comp(3..71)
DNA (69bp) protein (23aa)

This feature has no annotations

sw_7_scaffold_2882_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(150..1883)
DNA (1734bp) protein (578aa)
phrB1; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AAV45814.1}; EC=4.1.99.3 {ECO:0000313|EMBL:AAV45814.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
Deoxyribodipyrimidine photolyase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3T8_HALMA
sw_7_scaffold_2882_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2699..2917)
DNA (219bp) protein (73aa)
Surface glycoprotein n=9 Tax=Haloarcula RepID=Q5V3T4_HALMA
cell surface protein
Surface glycoprotein {ECO:0000313|EMBL:EMA24551.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 1
sw_7_scaffold_2882_4
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3027..4367
DNA (1341bp) protein (447aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=2 Tax=Haloarcula RepID=M0JS89_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EMA13585.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_7_scaffold_2882_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4364..6232
DNA (1869bp) protein (623aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KWG4_HALAR
menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
sw_7_scaffold_2882_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6986..7282
DNA (297bp) protein (99aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1230451 spec
ech1; naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTM8_HALAR
sw_7_scaffold_2882_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7254..7892
DNA (639bp) protein (213aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1227453 spec
naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LB70_HALJP
sw_7_scaffold_2882_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7906..9654)
DNA (1749bp) protein (583aa)
sensor box histidine kinase (EC:2.7.13.3)
Sensor box histidine kinase {ECO:0000313|EMBL:CCQ36406.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCQ36406.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQJ4_NATM8
sw_7_scaffold_2882_9
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9659..11113)
DNA (1455bp) protein (485aa)
KaiC-type circadian regulator Circ3 n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IZT5_9EURY
KaiC-type circadian regulator Circ3 {ECO:0000313|EMBL:EMA01593.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrifica
cirC; KaiC-type circadian regulator Circ3
sw_7_scaffold_2882_10
uncultivated_archaeon_J07ABHX6, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11231..11539)
DNA (309bp) protein (103aa)
id=24648265 bin=uncultivated_archaeon_J07ABHX6 tax=uncultivated_archaeon_J07ABHX6
id=24648265 bin=uncultivated_archaeon_J07ABHX6 tax=uncultivated_archaeon_J07ABHX6
sw_7_scaffold_2882_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11611..12288
DNA (678bp) protein (226aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=2 Tax=Haloarcula RepID=M0JUF0_9EURY
1,4-dihydroxy-2-naphthoate prenyltransferase
sw_7_scaffold_2882_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12344..13168
DNA (825bp) protein (275aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Chloromuconate cycloisomerase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J1L1_HALVA
ykfB1; chloromuconate cycloisomerase
sw_7_scaffold_2882_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13161..14645
DNA (1485bp) protein (495aa)
O-succinylbenzoate--CoA ligase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0P1_HALVA
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:EMA01918.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
O-succinylbenzoate--CoA ligase
sw_7_scaffold_2882_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14692..15366
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L9W5_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30366.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_2882_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15394..15744
DNA (351bp) protein (117aa)
Transcription repressor CinR n=9 Tax=Haloarcula RepID=G0HRA5_HALHT
transcription factor
Transcription repressor CinR {ECO:0000313|EMBL:EMA30367.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
sw_7_scaffold_2882_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15809..15889)
DNA (81bp) protein (27aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA01923.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying 16 items

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