ggKbase home page

sw_7_scaffold_966

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_966_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..1244)
-----------------
DNA (1242bp)
protein (414aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
tRNA-splicing ligase RtcB n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPU2_9EURY
2'-5' RNA ligase
sw_7_scaffold_966_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1395..1790
-----------------
DNA (396bp)
protein (132aa)
Topoisomerase DNA binding C4 zinc finger n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KUQ5_HALAR
top2; topoisomerase DNA binding C4 zinc finger
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EMA24658.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_7_scaffold_966_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2158..2424
-----------------
DNA (267bp)
protein (89aa)
Methyltransferase type 11 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYY3_HALMD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACV48672.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
sw_7_scaffold_966_trna_1
unknown

Not on your lists

2529..2599
-----------------
DNA (71bp)
transferRNA
sw_7_scaffold_966_4
unknown

Not on your lists

comp(2780..3136)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

sw_7_scaffold_966_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3193..4005)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWE5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA13306.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_7_scaffold_966_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4045..4518)
-----------------
DNA (474bp)
protein (158aa)
Peroxiredoxin n=2 Tax=Haloarcula hispanica RepID=G0HXK4_HALHT
bcp-1; peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AJF26657.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_966_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4611..4847
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXZ0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46578.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_966_8
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5021..5323
-----------------
DNA (303bp)
protein (101aa)
Sec-independent protein translocase TatAo n=2 Tax=Haloarcula hispanica RepID=V5TKA8_HALHI
sec-independent transolcation prot
Putative sec-independent transolcation prot {ECO:0000313|EMBL:AAV45544.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
sw_7_scaffold_966_trna_2
unknown

Not on your lists

5352..5425
-----------------
DNA (74bp)
transferRNA
sw_7_scaffold_966_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5518..5922)
-----------------
DNA (405bp)
protein (135aa)
Halocyanin-like protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPN3_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:ELZ85723.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
halocyanin domain protein
sw_7_scaffold_966_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5926..7575
-----------------
DNA (1650bp)
protein (550aa)
Cryptochrome/photolyase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7N7_HALJP
Cryptochrome/photolyase {ECO:0000313|EMBL:EMA29622.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
photolyase
sw_7_scaffold_966_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7660..9378)
-----------------
DNA (1719bp)
protein (573aa)
ABC-1 domain protein n=2 Tax=Haloarcula hispanica RepID=G0HXL9_HALHT
ABC-1 domain-containing protein
ABC-1 domain protein {ECO:0000313|EMBL:AEM56751.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain AT
sw_7_scaffold_966_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9423..11660)
-----------------
DNA (2238bp)
protein (746aa)
Copper-transporting ATPase CopA {ECO:0000313|EMBL:AEM56752.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEM56752.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Molybdenum-binding protein n=2 Tax=Haloarcula hispanica RepID=V5TJP2_HALHI
molybdenum-binding protein
sw_7_scaffold_966_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12102..13004)
-----------------
DNA (903bp)
protein (301aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VY07_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02150.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_7_scaffold_966_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13006..13914)
-----------------
DNA (909bp)
protein (303aa)
ABC transporter n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W0R9_9EURY
ABC transporter
ABC transporter {ECO:0000313|EMBL:AGN02151.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_7_scaffold_966_15

Not on your lists

comp(13917..15287)
-----------------
DNA (1371bp)
protein (457aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y1Z0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08693.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
kinase domain protein
sw_7_scaffold_966_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15427..16134)
-----------------
DNA (708bp)
protein (236aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LB15_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29614.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_966_17
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16131..16820)
-----------------
DNA (690bp)
protein (230aa)
Transcription repressor n=3 Tax=Haloarcula RepID=Q5V4N3_HALMA
sirR; transcription repressor
Transcription repressor {ECO:0000313|EMBL:AAV45519.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_7_scaffold_966_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16896..17057)
-----------------
DNA (162bp)
protein (54aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HXM8_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56760.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_7_scaffold_966_19
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17138..17620
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFX4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32441.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
membrane-bound metal-dependent hydrolase
sw_7_scaffold_966_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17613..17861)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7S7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29611.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_966_21
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17988..19268
-----------------
DNA (1281bp)
protein (427aa)
putative PQQ-dependent glucose dehydrogenase (EC:1.1.5.2)
Putative PQQ-dependent glucose dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I9Y6_9EURY
Quinoprotein glucose dehydrogenase B {ECO:0000313|EMBL:CQR50510.1}; Flags: Precursor;; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="
sw_7_scaffold_966_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19255..20493)
-----------------
DNA (1239bp)
protein (413aa)
Arabinose operon protein AraL n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KPZ0_HALAR
Arabinose operon protein AraL {ECO:0000313|EMBL:EMA23402.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
HAD family hydrolase
sw_7_scaffold_966_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20493..21098)
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZP0_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48808.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_966_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21139..21828)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KKM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA13274.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_7_scaffold_966_25
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21870..22517)
-----------------
DNA (648bp)
protein (216aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KT58_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA23399.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_7_scaffold_966_26
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22611..23111
-----------------
DNA (501bp)
protein (167aa)
Phosphatase, C-terminal domain of histone macro H2A1 like protein n=2 Tax=Haloarcula hispanica RepID=G0HXN7_HALHT
Appr-1-p processing protein
Appr-1-p processing protein {ECO:0000313|EMBL:AHB65567.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N6
sw_7_scaffold_966_27
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23137..24168)
-----------------
DNA (1032bp)
protein (344aa)
Na+ efflux ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KVP5_9EURY
Na+ efflux ABC transporter permease {ECO:0000313|EMBL:EMA24968.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula calif
ABC transporter permease
sw_7_scaffold_966_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24218..26140)
-----------------
DNA (1923bp)
protein (641aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KT53_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA23394.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
ABC transporter permease
Displaying items 1-30 of 40 in total

View Taxonomy