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sw_7_scaffold_118

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_118_1
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..246
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRT9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13044.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_118_2
unknown

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324..938
DNA (615bp) protein (205aa)

This feature has no annotations

sw_7_scaffold_118_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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961..1674
DNA (714bp) protein (238aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase ThyX n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRU9_HALVA
sw_7_scaffold_118_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1797..2972
DNA (1176bp) protein (392aa)
Membrane protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JK10_NATP1
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ELY73184.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB31614.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natr
sw_7_scaffold_118_trna_1
unknown

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3086..3160
DNA (75bp)
transferRNA
sw_7_scaffold_118_5
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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3345..4832
DNA (1488bp) protein (496aa)
Ig domain protein group 1 domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU55_9CYAN
Ig domain-containing protein group 1 domain-containing protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AFY86352.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203
sw_7_scaffold_118_6
unknown

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5384..6568
DNA (1185bp) protein (395aa)

This feature has no annotations

sw_7_scaffold_118_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6717..7424
DNA (708bp) protein (236aa)
Halocyanin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X4_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:EMA39999.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hcp4; halocyanin precursor-like
sw_7_scaffold_118_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7538..8641)
DNA (1104bp) protein (368aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MLI2_HALMO
Cysteine desulfurase {ECO:0000313|EMBL:EMA45584.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
sw_7_scaffold_118_9
unknown

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comp(8727..8918)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_7_scaffold_118_10
Equid herpesvirus 1, Varicellovirus, Herpesvirales, Viruses

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comp(9168..10103)
DNA (936bp) protein (312aa)
Membrane glycoprotein n=1 Tax=Equid herpesvirus 1 RepID=O39781_9ALPH
Envelope glycoprotein J {ECO:0000313|EMBL:BAR43435.1}; TaxID=10326 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herp
Mucin-19
sw_7_scaffold_118_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10148..11284)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45322.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_118_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11485..12252
DNA (768bp) protein (256aa)
3'-5' exonuclease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU7_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA45276.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
hypothetical protein
sw_7_scaffold_118_13
unknown

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comp(12822..12944)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_7_scaffold_118_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13222..13887
DNA (666bp) protein (222aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW86_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EFW91220.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halada
putative DNA binding protein
sw_7_scaffold_118_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14033..14677)
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
DNA binding protein
sw_7_scaffold_118_16
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15262..15765
DNA (504bp) protein (168aa)
Bacteriorhodopsin n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDG5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELZ94097.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
bacteriorhodopsin
sw_7_scaffold_118_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15844..16722
DNA (879bp) protein (293aa)
Amidohydrolase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVZ9_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EFW91412.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidohydrolase 2
sw_7_scaffold_118_18
unknown

Not on your lists

16917..17228
DNA (312bp) protein (104aa)

This feature has no annotations

sw_7_scaffold_118_19
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(17287..18405)
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7L8_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aiding
cdc6; cell division control protein 6
sw_7_scaffold_118_20
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18508..20646)
DNA (2139bp) protein (713aa)
DNA-binding protein MutS2 n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JFK5_NATP1
mismatch repair ATPase (MutS family)
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain
sw_7_scaffold_118_21
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20700..20960)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6N0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02422.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_7_scaffold_118_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21111..22979
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8V4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00964.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 23 items

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