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sw_7_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 106 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_112_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:CDM65130.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CDM65130.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
bglX-2; beta-glucosidase (EC:3.2.1.21); K05349 beta-glucosidase [EC:3.2.1.21]
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037F2D53
sw_7_scaffold_112_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(222..2426)
DNA (2205bp) protein (735aa)
Fe-S oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDZ8_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54910.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Fe-S oxidoreductase
sw_7_scaffold_112_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2558..3265)
DNA (708bp) protein (236aa)
Cobalt transporter n=3 Tax=Halococcus hamelinensis RepID=M0M6S9_9EURY
Cobalt transporter {ECO:0000313|EMBL:EMA41497.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
bioN; ABC-type transport system permease protein (probable substrate biotin)
sw_7_scaffold_112_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3384..4187)
DNA (804bp) protein (268aa)
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDQ1_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA43876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
abc21a; cobalt ABC transporter ATP-binding protein
sw_7_scaffold_112_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4184..4810)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
BioY protein
sw_7_scaffold_112_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4961..5563
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4B6_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13478.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_112_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5843..6154
DNA (312bp) protein (104aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZV7_9EURY
transcription termination factor Tfs
sw_7_scaffold_112_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6402..6971)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8P5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52995.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_7_scaffold_112_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7105..8412
DNA (1308bp) protein (436aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N679_9EURY
glucose-6-phosphate isomerase
sw_7_scaffold_112_10
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8450..8911)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZ77_NATMM
putative nucleic acid-binding protein with PIN domain and Zn ribbon
Uncharacterized protein {ECO:0000313|EMBL:ADD06269.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_7_scaffold_112_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8929..9174)
DNA (246bp) protein (82aa)
PRC-barrel domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S9_9EURY
PRC-barrel domain protein {ECO:0000313|EMBL:ELZ29697.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
PRC-barrel domain protein
sw_7_scaffold_112_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9476..11290
DNA (1815bp) protein (605aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4F1_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor aIF-2
sw_7_scaffold_112_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11428..11700
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MU47_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48294.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
sw_7_scaffold_112_14
unknown

Not on your lists

comp(11755..12168)
DNA (414bp) protein (138aa)

This feature has no annotations

sw_7_scaffold_112_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12287..12961)
DNA (675bp) protein (225aa)
Pyruvoyl-dependent arginine decarboxylase {ECO:0000313|EMBL:CAI50333.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CAI50333.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INH0_NATPD
hypothetical protein
sw_7_scaffold_112_16

Not on your lists

13076..14266
DNA (1191bp) protein (397aa)
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase {ECO:0000313|EMBL:AEN04749.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEN04749.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Aspartate transaminase n=1 Tax=halophilic archaeon DL31 RepID=G2MKF2_9ARCH
sw_7_scaffold_112_17
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14402..15040)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUE4_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR49410.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_7_scaffold_112_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15127..15579)
DNA (453bp) protein (151aa)
Ferritin Dps family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBZ9_HALJB
Ferritin Dps family protein
Ferritin Dps family protein {ECO:0000313|EMBL:ADJ16906.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeo
sw_7_scaffold_112_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15666..15875)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Halarchaeum acidiphilum RepID=U2YGA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53266.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_7_scaffold_112_20
unknown

Not on your lists

15898..16518
DNA (621bp) protein (207aa)

This feature has no annotations

sw_7_scaffold_112_21
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16648..17061
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0GPS4_HALL2
Uncharacterized protein {ECO:0000313|EMBL:ELZ93408.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
sw_7_scaffold_112_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17147..17770
DNA (624bp) protein (208aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZZ5_9EURY
sw_7_scaffold_112_23
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17879..18922
DNA (1044bp) protein (348aa)
Abortive infection protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J607_HALJB
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADJ13813.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeot
sw_7_scaffold_112_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19358..20629)
DNA (1272bp) protein (424aa)
Mn2+ and Fe2+ transporter-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFU5_9EURY
Mn2+ and Fe2+ transporter-like protein {ECO:0000313|EMBL:EMA56857.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus t
Mn2+ and Fe2+ transporter-like protein
sw_7_scaffold_112_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20904..21302
DNA (399bp) protein (133aa)
PPOX class putative F420-dependent enzyme n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRU0_9EURY
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:EFW92709.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
PPOX class F420-dependent protein
sw_7_scaffold_112_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21378..22667
DNA (1290bp) protein (430aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9U7_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EMA42501.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
MiaB-like tRNA modifying enzyme
sw_7_scaffold_112_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22823..23767
DNA (945bp) protein (315aa)
AAA family ATPase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8V5_HALJB
AAA family ATPase
AAA family ATPase {ECO:0000313|EMBL:ELY40552.1}; AAA family ATPase, CDC48 subfamily protein {ECO:0000313|EMBL:ADJ14290.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
sw_7_scaffold_112_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24291..24716
DNA (426bp) protein (142aa)
DNA binding domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML39_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA45449.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
putative DNA binding protein
sw_7_scaffold_112_29
unknown

Not on your lists

comp(25291..25560)
DNA (270bp) protein (90aa)

This feature has no annotations

sw_7_scaffold_112_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25715..27073
DNA (1359bp) protein (453aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1227456
tRNA pseudouridine synthase Pus10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2P2_9EURY
tRNA pseudouridine 55 synthase archaea
Displaying items 1-30 of 106 in total

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