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sw_7_scaffold_1360

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1360_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..223)
DNA (222bp) protein (74aa)
(2Fe-2S)-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B41597
Ferredoxin {ECO:0000313|EMBL:EJN61649.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
sw_7_scaffold_1360_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(350..1069)
DNA (720bp) protein (240aa)
Transcription initiation factor IIB n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXV0_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
sw_7_scaffold_1360_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1601..2320
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_7_scaffold_1360_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2385..3128
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBT1_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA55013.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
sw_7_scaffold_1360_5
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3382..4020)
DNA (639bp) protein (213aa)
HoxA-like transcriptional regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R432_HALMT
cheY; HoxA-like transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:AHZ21649.1}; HoxA-like transcriptional regulator {ECO:0000313|EMBL:AFK18992.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
sw_7_scaffold_1360_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4216..4614
DNA (399bp) protein (133aa)
receiver/sensor box histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EZG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60987.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_7_scaffold_1360_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4687..5538)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E3J2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42356.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_7_scaffold_1360_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5719..6897)
DNA (1179bp) protein (393aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=1132509 species="Ar
DNA primase small subunit PriS n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXW4_9EURY
DNA primase
sw_7_scaffold_1360_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7167..10157)
DNA (2991bp) protein (997aa)
Glycoside hydrolase family protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IUL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26925.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
PKD domain-containing protein
sw_7_scaffold_1360_10
unknown

Not on your lists

comp(10977..11141)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_7_scaffold_1360_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11439..12527)
DNA (1089bp) protein (363aa)
Halocyanin domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY85_HALMD
halocyanin domain protein
Halocyanin domain protein {ECO:0000313|EMBL:ACV48545.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
sw_7_scaffold_1360_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12527..13099)
DNA (573bp) protein (191aa)
Nitrite reductase copper containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWC9_HALMO
Nitrite reductase copper containing protein {ECO:0000313|EMBL:EMA48750.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
aniA; nitrite reductase copper containing protein
sw_7_scaffold_1360_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13112..13408)
DNA (297bp) protein (99aa)
Nitrite reductase copper containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4J9_9EURY
Nitrite reductase copper containing protein {ECO:0000313|EMBL:EMA52867.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
aniA; nitrite reductase copper containing protein
sw_7_scaffold_1360_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13704..14081
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHA9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22680.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_1360_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14078..14356
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPN4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93450.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_7_scaffold_1360_16
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14483..14782)
DNA (300bp) protein (100aa)
Membrane protein-like {ECO:0000313|EMBL:EAT04842.1}; Flags: Precursor;; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
sw_7_scaffold_1360_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15046..16413)
DNA (1368bp) protein (456aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKF6_9EURY
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:EMA46136.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
sw_7_scaffold_1360_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16592..17083
DNA (492bp) protein (164aa)
MOSC domain containing protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B770_9EURY
MOSC domain containing protein
Sulfurase {ECO:0000313|EMBL:KDE60406.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_7_scaffold_1360_19

Not on your lists

17402..18733
DNA (1332bp) protein (444aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8V1_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS07502.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily protein
sw_7_scaffold_1360_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18795..19961)
DNA (1167bp) protein (389aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycine/D-amino acid oxidase, deaminating
sw_7_scaffold_1360_21
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20110..21105
DNA (996bp) protein (332aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BIH6_9EURY
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:ELZ10277.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia
ornithine cyclodeaminase/mu-crystallin
sw_7_scaffold_1360_trna_1
unknown

Not on your lists

21209..21293
DNA (85bp)
transferRNA
Displaying 22 items

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