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sw_7_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_18_1
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..908
DNA (906bp) protein (302aa)
Ribonuclease BN n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LVA7_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA36314.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
ribonuclease BN
sw_7_scaffold_18_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1028..2011
DNA (984bp) protein (328aa)
PA-phosphatase like phosphoesterase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7Q7_9EURY
PA-phosphatase like phosphoesterase {ECO:0000313|EMBL:EMA53901.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
phosphoesterase PA-phosphatase-related protein
sw_7_scaffold_18_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1993..3363)
DNA (1371bp) protein (457aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeomet
Glutamine synthetase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMJ2_HALBP
sw_7_scaffold_18_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3489..3947
DNA (459bp) protein (153aa)
Transcription regulator AsnC-type-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC83_9EURY
Transcription regulator AsnC-type-like protein {ECO:0000313|EMBL:EMA55183.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
trh2; AsnC family transcriptional regulator
sw_7_scaffold_18_5
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4051..4527
DNA (477bp) protein (159aa)
cystathionine gamma-lyase (EC:4.4.1.1) Tax=GWA2_Bacteroidetes_30_7_curated
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7V7_METCZ
sw_7_scaffold_18_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4528..5256
DNA (729bp) protein (243aa)
metB2; cystathionine synthase/lyase (cystathionine gamma-synthase, cystathionine gamma-lyase, cystathionine beta-lyase) (EC:2.5.1.48 4.4.1.1 4.4.1.8)
Cystathionine gamma-synthase n=2 Tax=Haladaptatus paucihalophilus RepID=E7R023_9EURY
Cystathionine gamma-synthase {ECO:0000313|EMBL:EFW89917.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
sw_7_scaffold_18_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5382..7334
DNA (1953bp) protein (651aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=797209 species="Archaea; Eury
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPH2_9EURY
sw_7_scaffold_18_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7645..7794)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Halococcus RepID=M0MF84_HALMO
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
rpl40e; 50S ribosomal protein L40e
sw_7_scaffold_18_9
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7895..8461)
DNA (567bp) protein (189aa)
Probable ribosome biogenesis protein OE_3895F n=2 Tax=Halobacterium salinarum RepID=TSR3_HALS3
hypothetical protein
Probable ribosome biogenesis protein VNG_2075C {ECO:0000255|HAMAP-Rule:MF_01116}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source=
sw_7_scaffold_18_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8547..8873
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E8Y1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42854.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_7_scaffold_18_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8947..9585)
DNA (639bp) protein (213aa)
DSBA oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6B9_HALMO
DSBA oxidoreductase {ECO:0000313|EMBL:EMA41362.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
DSBA oxidoreductase
sw_7_scaffold_18_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9705..10262
DNA (558bp) protein (186aa)
Serine acetyltransferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6A6_HALJB
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:ADJ15824.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
sw_7_scaffold_18_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10326..10754)
DNA (429bp) protein (143aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N680_9EURY
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:EMA52624.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
dCTP deaminase
sw_7_scaffold_18_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11191..11751)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N163_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51712.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transcriptional regulator
sw_7_scaffold_18_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11880..12716)
DNA (837bp) protein (279aa)
Oxidoreductase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4Y6_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA51760.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
yusZ4; short chain dehydrogenase/reductase
sw_7_scaffold_18_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12898..13650
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V727_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA27584.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
sw_7_scaffold_18_17
unknown

Not on your lists

13715..14002
DNA (288bp) protein (96aa)

This feature has no annotations

sw_7_scaffold_18_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13999..14436
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5T7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39979.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_18_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14457..15302)
DNA (846bp) protein (282aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGQ6_9EURY
sw_7_scaffold_18_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15318..16238)
DNA (921bp) protein (307aa)
Rhomboid family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKV9_HALMO
Rhomboid family protein {ECO:0000313|EMBL:EMA46337.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
rhomboid family protein/GlpG-like protein
sw_7_scaffold_18_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16364..16798
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIR0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA45582.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_7_scaffold_18_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16795..18540
DNA (1746bp) protein (582aa)
PHP domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN3_9EURY
PHP domain protein {ECO:0000313|EMBL:EMA44217.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
PHP domain protein
sw_7_scaffold_18_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18537..19094
DNA (558bp) protein (186aa)
Conserved Archaeal protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMA7_9EURY
conserved hypothetical protein (DUF82)
Conserved Archaeal protein {ECO:0000313|EMBL:ERJ05539.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32873.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
sw_7_scaffold_18_24
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19133..19696)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DHW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33779.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_7_scaffold_18_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19819..21039)
DNA (1221bp) protein (407aa)
hypothetical protein id=24646155 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10334.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_18_26
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21342..21680
DNA (339bp) protein (113aa)
Cupin n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZTX3_9EURY
Cupin {ECO:0000313|EMBL:ELY89511.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
cupin
sw_7_scaffold_18_27
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21763..22563)
DNA (801bp) protein (267aa)
Beta-lactamase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AHA3_NATGS
Zn-dependent hydrolase
Beta-lactamase {ECO:0000313|EMBL:ELY74326.1}; Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ72455.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
sw_7_scaffold_18_28
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22786..23040
DNA (255bp) protein (85aa)
AbrB family transcriptional regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F0K9_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ53465.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
AbrB family transcriptional regulator
sw_7_scaffold_18_29
unknown

Not on your lists

23037..23468
DNA (432bp) protein (144aa)

This feature has no annotations

sw_7_scaffold_18_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23513..24772)
DNA (1260bp) protein (420aa)
icd; isocitrate dehydrogenase (NADP+) (EC:1.1.1.42)
Isocitrate dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1K7_9EURY
Isocitrate dehydrogenase {ECO:0000313|EMBL:EMA50555.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
Displaying items 1-30 of 50 in total

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