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sw_7_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_332_trna_1
unknown

Not on your lists

comp(258..342)
DNA (85bp)
transferRNA
sw_7_scaffold_332_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(406..984)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M210_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39731.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_332_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1083..1391
DNA (309bp) protein (103aa)
Transcription initiation factor TFB 4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE39_9EURY
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA55828.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
tfbA_4; transcription initiation factor TFB 4
sw_7_scaffold_332_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1445..1936)
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:ELZ36187.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELZ36187.1};; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Phosphopantetheine adenylyltransferase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPN2_9EURY
cytidyltransferase-related enzyme
sw_7_scaffold_332_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2091..2876)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SI71_9EURY
Transcription regulator {ECO:0000313|EMBL:GAD53788.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
TrmB family transcriptional regulator
sw_7_scaffold_332_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2975..4054)
DNA (1080bp) protein (360aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=795797 species="
Carboxylate-amine ligase HacjB3_07800 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2I8_HALJB
carboxylate-amine ligase
sw_7_scaffold_332_6
unknown

Not on your lists

4181..4333
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_332_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4454..5134)
DNA (681bp) protein (227aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrial
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W638_9EURY
fibrillarin
sw_7_scaffold_332_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5131..5982)
DNA (852bp) protein (284aa)
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT46_9EURY
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein {ECO:0000313|EMBL:EMA47919.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
nucleolar protein-like protein
sw_7_scaffold_332_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6082..7680)
DNA (1599bp) protein (533aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LPU1_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA35491.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
AMP-dependent synthetase and ligase
sw_7_scaffold_332_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7800..9002
DNA (1203bp) protein (401aa)
N-acylglucosamine 2-epimerase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXH1_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ELY53891.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
N-acyl-D-glucosamine 2-epimerase
sw_7_scaffold_332_11
unknown

Not on your lists

9853..9942
DNA (90bp) protein (30aa)

This feature has no annotations

sw_7_scaffold_332_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10176..11483
DNA (1308bp) protein (436aa)
Sodium:dicarboxylate symporter n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD12_HALXS
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AEH38485.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strai
sw_7_scaffold_332_13
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11654..12022)
DNA (369bp) protein (123aa)
Sterol desaturase family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HKX6_9EURY
Sterol desaturase family protein {ECO:0000313|EMBL:ELZ85126.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC
hypothetical protein
sw_7_scaffold_332_14
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12376..13803
DNA (1428bp) protein (476aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743, ECO:0000313|EMBL:ELZ81601.1};; TaxID=12
fumC; class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAN3_9EURY
sw_7_scaffold_332_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13730..14575)
DNA (846bp) protein (282aa)
SOUL heme-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEH6_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EJN58369.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
SOUL heme-binding protein
sw_7_scaffold_332_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14626..15045)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035E1A13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47027.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_332_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15104..16384)
DNA (1281bp) protein (427aa)
Haloacid dehalogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDM7_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA55194.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
putative HAD superfamily hydrolase
sw_7_scaffold_332_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16541..17017)
DNA (477bp) protein (159aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDZ4_9EURY
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ELZ20572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
sw_7_scaffold_332_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17138..17998)
DNA (861bp) protein (287aa)
Zinc transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWD2_9EURY
Zinc transporter {ECO:0000313|EMBL:ELZ26958.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
hypothetical protein
sw_7_scaffold_332_20
unknown

Not on your lists

18127..18405
DNA (279bp) protein (93aa)

This feature has no annotations

sw_7_scaffold_332_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18478..19182)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUC6_9EURY
bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA36773.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
sw_7_scaffold_332_22
unknown

Not on your lists

comp(19327..19662)
DNA (336bp) protein (112aa)

This feature has no annotations

sw_7_scaffold_332_23
unknown

Not on your lists

20348..20557
DNA (210bp) protein (70aa)

This feature has no annotations

sw_7_scaffold_332_24
unknown

Not on your lists

comp(20584..21177)
DNA (594bp) protein (198aa)

This feature has no annotations

sw_7_scaffold_332_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21304..22410)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89803.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
deacylase
sw_7_scaffold_332_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22572..23639
DNA (1068bp) protein (356aa)
alpha/beta hydrolase id=24628905 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Esterase/lipase {ECO:0000313|EMBL:ERG91648.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
alpha/beta hydrolase
sw_7_scaffold_332_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23672..24229
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZHF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60135.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_7_scaffold_332_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24341..27244
DNA (2904bp) protein (968aa)
DNA mismatch repair protein MutS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ40_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
mutS1a; DNA mismatch repair protein MutS
sw_7_scaffold_332_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27195..29042
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP70_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
mutL; DNA mismatch repair protein MutL
Displaying items 1-30 of 48 in total

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