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sw_7_scaffold_513

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_513_1
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

302..553
DNA (252bp) protein (84aa)
CRISPR-associated protein Cas5, Hmari subtype n=2 Tax=Haloferax RepID=L5NUH5_9EURY
CRISPR-associated protein Cas5, Hmari subtype {ECO:0000313|EMBL:ELK54311.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
sw_7_scaffold_513_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

564..3092
DNA (2529bp) protein (843aa)
Helicase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E6H5_9EURY
Helicase {ECO:0000313|EMBL:ELZ43400.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
helicase
sw_7_scaffold_513_3
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3646..3948
DNA (303bp) protein (101aa)
adenylosuccinate lyase (EC:4.3.2.2)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AFK8_NATA1
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ELY97186.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica
sw_7_scaffold_513_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3982..4320
DNA (339bp) protein (113aa)
adenylosuccinate lyase (EC:4.3.2.2)
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:KGE67177.1}; EC=5.5.1.2 {ECO:0000313|EMBL:KGE67177.1};; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadale
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Pseudomonas fluorescens RepID=UPI0003070D6A
sw_7_scaffold_513_5
unknown

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comp(4180..4485)
DNA (306bp) protein (102aa)

This feature has no annotations

sw_7_scaffold_513_6
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4751..4996
DNA (246bp) protein (82aa)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AFK8_NATA1
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:ELY97186.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica
3-carboxy-cis,cis-muconate cycloisomerase
sw_7_scaffold_513_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5046..6596)
DNA (1551bp) protein (517aa)
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:EMA46292.1}; EC=1.4.4.2 {ECO:0000313|EMBL:EMA46292.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase subunit 2 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKR5_9EURY
sw_7_scaffold_513_8
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6599..7936)
DNA (1338bp) protein (446aa)
Glycine dehydrogenase subunit 1 {ECO:0000313|EMBL:ELZ53887.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ELZ53887.1};; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase subunit 1 n=1 Tax=Halorubrum distributum JCM 9100 RepID=M0F3X2_9EURY
sw_7_scaffold_513_9
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8090..8827)
DNA (738bp) protein (246aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialba
Probable RNA 2'-phosphotransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0JWJ2_9EURY
RNA:NAD 2'-phosphotransferase
sw_7_scaffold_513_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8946..9842
DNA (897bp) protein (299aa)
6-phosphogluconate dehydrogenase NAD-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZU2_9EURY
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EMA37645.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
6-phosphogluconate dehydrogenase NAD-binding protein
sw_7_scaffold_513_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10401..11327
DNA (927bp) protein (309aa)
Acetamidase/formamidase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1I6_9EURY
Acetamidase/formamidase family protein {ECO:0000313|EMBL:EMA51832.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus t
acetamidase/formamidase family protein
sw_7_scaffold_513_12
unknown

Not on your lists

comp(11405..11554)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_7_scaffold_513_13
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11637..12641)
DNA (1005bp) protein (335aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C379_9EURY
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ELZ17108.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena lim
sw_7_scaffold_513_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12819..13841
DNA (1023bp) protein (341aa)
Transport protein (Drug/metabolite family transporter) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID2_9EURY
Transport protein (Drug/metabolite family transporter) {ECO:0000313|EMBL:EMA44474.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
transporter of the drug/metabolite transporter (DMT) superfamily
sw_7_scaffold_513_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13845..14444
DNA (600bp) protein (200aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0U5_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELY55345.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source=
putative DNA binding protein
sw_7_scaffold_513_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14464..15489)
DNA (1026bp) protein (342aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W977_9EURY
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGN01239.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harc
sw_7_scaffold_513_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15697..16272
DNA (576bp) protein (192aa)
Laminin G n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYS0_9EURY
Laminin G {ECO:0000313|EMBL:EMA50761.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying 17 items

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