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sw_7_scaffold_541

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_541_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..763
DNA (762bp) protein (254aa)
RNA-binding protein AU-1 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMY8_9EURY
RNA-binding protein
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
sw_7_scaffold_541_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(790..2067)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHY5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61404.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
major facilitator superfamily MFS_1
sw_7_scaffold_541_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2216..2884)
DNA (669bp) protein (223aa)
Riboflavin synthase, alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYM6_HALMD
riboflavin synthase subunit alpha
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ACV46687.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_7_scaffold_541_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2976..3983)
DNA (1008bp) protein (336aa)
Sodium/calcium exchanger membrane region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0H7_HALTV
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ADB62874.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_7_scaffold_541_5
unknown

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4173..4313
DNA (141bp) protein (47aa)

This feature has no annotations

sw_7_scaffold_541_6
unknown

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4483..4908
DNA (426bp) protein (142aa)

This feature has no annotations

sw_7_scaffold_541_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4963..6801)
DNA (1839bp) protein (613aa)
UvrD/REP helicase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN24_9EURY
UvrD/REP helicase {ECO:0000313|EMBL:EMA45855.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
UvrD/REP helicase
sw_7_scaffold_541_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7026..8003)
DNA (978bp) protein (326aa)
Glucokinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WA41_9EURY
glucokinase
Glucokinase {ECO:0000313|EMBL:AGN02294.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_7_scaffold_541_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8127..8582)
DNA (456bp) protein (152aa)
Universal stress protein uspa-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MSU7_9EURY
Universal stress protein uspa-like protein {ECO:0000313|EMBL:EMA48423.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
UspA domain-containing protein
sw_7_scaffold_541_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8744..9490
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3A9_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39079.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_7_scaffold_541_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9794..10366)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92105.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_7_scaffold_541_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10589..13561
DNA (2973bp) protein (991aa)
Excinuclease ABC subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MND4_9EURY
Excinuclease ABC subunit A {ECO:0000313|EMBL:EMA46254.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
excinuclease ABC subunit A
sw_7_scaffold_541_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13647..13952
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E706_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42732.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
sugar metabolism cluster protein
sw_7_scaffold_541_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13927..14355
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ56276.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_7_scaffold_541_15
unknown

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comp(14488..14715)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_7_scaffold_541_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15212..15859
DNA (648bp) protein (216aa)
Potassium transporter peripheral membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM29_9EURY
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EMA46721.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
TrkA-N domain-containing protein
sw_7_scaffold_541_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15996..17018)
DNA (1023bp) protein (341aa)
UspA domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVJ5_HALMO
UspA domain-containing protein {ECO:0000313|EMBL:EMA49767.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
cat3; cationic amino acid transporter
sw_7_scaffold_541_18
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17206..17538
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003759460
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADB60470.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source
sw_7_scaffold_541_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17539..18207
DNA (669bp) protein (223aa)
Amino acid permease n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8P0_9EURY
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AGN00789.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_7_scaffold_541_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18304..19584
DNA (1281bp) protein (427aa)
Putative cationic amino acid transport protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9Y6_HALMT
cat2; putative cationic amino acid transport protein
Amino acid permease {ECO:0000313|EMBL:AHZ24094.1}; Putative cationic amino acid transport protein {ECO:0000313|EMBL:AFK21046.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
sw_7_scaffold_541_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19651..20508
DNA (858bp) protein (286aa)
Cationic amino acid transporter n=2 Tax=Halococcus hamelinensis RepID=M0LWT9_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:EMA37936.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
Usp family protein
sw_7_scaffold_541_22
unknown

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20671..20772
DNA (102bp) protein (34aa)

This feature has no annotations

sw_7_scaffold_541_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20891..22009
DNA (1119bp) protein (373aa)
Geranylgeranyl reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUC5_9EURY
Geranylgeranyl reductase {ECO:0000313|EMBL:EMA35705.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
geranylgeranyl reductase
sw_7_scaffold_541_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22086..22592
DNA (507bp) protein (169aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYA5_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA50707.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
acetyltransferase, ribosomal protein N-acetylase
sw_7_scaffold_541_25
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22777..23175
DNA (399bp) protein (133aa)
hypothetical protein id=24618745 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06352.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_7_scaffold_541_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23248..24012)
DNA (765bp) protein (255aa)
Glycine cleavage system protein T n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5G4_9EURY
Glycine cleavage system protein T {ECO:0000313|EMBL:ELZ30078.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
folate-binding protein YgfZ
Displaying 26 items

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