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sw_7_scaffold_110

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_110_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
Segregation and condensation protein A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1P3_SALRD
scpA; segregation and condensation protein A
Segregation and condensation protein A {ECO:0000256|SAAS:SAAS00093938, ECO:0000313|EMBL:CBH24904.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
sw_7_scaffold_110_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(471..2606)
DNA (2136bp) protein (712aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000255|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000255|HAMAP-Rule:MF_01595}; Short=PNPase
pnp; polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=24659734 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pnp; polynucleotide phosphorylase/polyadenylase
sw_7_scaffold_110_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(2748..3014)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Salinibacter ruber RepID=RS15_SALRD
rpsO; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_7_scaffold_110_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3140..4075)
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=309807 species="Bacteria; Bacteroidete
Riboflavin biosynthesis protein RibF n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1N9_SALRD
ribF; riboflavin biosynthesis protein RibF
sw_7_scaffold_110_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4097..4825)
DNA (729bp) protein (243aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Salisaeta longa RepID=UPI0003B743E4
tRNA pseudouridine synthase B
sw_7_scaffold_110_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4893..5291)
DNA (399bp) protein (133aa)
rbfA; ribosome-binding factor A
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A id=24659737 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000313|EMBL:CBH24909.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_7_scaffold_110_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5365..8280)
DNA (2916bp) protein (972aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=24659738 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_7_scaffold_110_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8350..10083)
DNA (1734bp) protein (578aa)
nusA; transcription elongation factor NusA
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24659739 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_7_scaffold_110_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10145..10612)
DNA (468bp) protein (156aa)
hypothetical protein
hypothetical protein; K09748 ribosome maturation factor RimP id=24659740 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_7_scaffold_110_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10943..11995)
DNA (1053bp) protein (351aa)
prfB; peptide chain release factor 2
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=24659741 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_7_scaffold_110_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12175..13380)
DNA (1206bp) protein (402aa)
Aspartate aminotransferase n=2 Tax=Salinibacter ruber RepID=Q2S1N3_SALRD
aspC; aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:ABC43804.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_7_scaffold_110_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13557..15050
DNA (1494bp) protein (498aa)
Aldehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA60_SALRM
aldHT; Aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CBH24915.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_7_scaffold_110_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15163..15465)
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein id=24659744 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24916.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15637..15987)
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24659745 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43979.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15997..16770)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA63_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24918.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16819..18324)
DNA (1506bp) protein (502aa)
NAD-dependent malic enzyme {ECO:0000313|EMBL:ABC44896.1}; EC=1.1.1.38 {ECO:0000313|EMBL:ABC44896.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
NAD-dependent malic enzyme n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M8_SALRD
NAD-dependent malic enzyme
sw_7_scaffold_110_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(18397..20943)
DNA (2547bp) protein (849aa)
30S ribosomal protein S1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA65_SALRM
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:CBH24920.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_7_scaffold_110_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21314..21898)
DNA (585bp) protein (195aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000313|EMBL:CBH24921.1}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate ki
Cytidylate kinase n=2 Tax=Salinibacter ruber RepID=KCY_SALRD
cmk; cytidylate kinase
sw_7_scaffold_110_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22067..22681)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45506.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22981..23541
DNA (561bp) protein (187aa)
methyltransferase
hypothetical protein id=24656806 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
SpoU rRNA methylase family protein {ECO:0000313|EMBL:ABC45198.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_7_scaffold_110_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23706..25775
DNA (2070bp) protein (690aa)
mutA; methylmalonyl-CoA mutase small subunit; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] id=24659752 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:CBH24924.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24924.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
mutA; methylmalonyl-CoA mutase small subunit
sw_7_scaffold_110_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25840..27999
DNA (2160bp) protein (720aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CBH24925.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24925.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Methylmalonyl-CoA mutase large subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA70_SALRM
mutB; methylmalonyl-CoA mutase large subunit
sw_7_scaffold_110_23
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28028..28630
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VMB1_9CYAN
protein of unknown function DUF820
Uncharacterized protein {ECO:0000313|EMBL:AFZ08674.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 711
sw_7_scaffold_110_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28887..29924
DNA (1038bp) protein (346aa)
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABC45690.1}; EC=2.7.-.- {ECO:0000313|EMBL:ABC45690.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
LAO/AO transport system ATPase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M1_SALRD
arginine/ornithine transport system ATPase
sw_7_scaffold_110_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30071..30574
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA72_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30803..33100
DNA (2298bp) protein (766aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1L9_SALRD
glutaminyl-tRNA synthetase
sw_7_scaffold_110_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33131..33481)
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24657893 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25102.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_110_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33738..34616)
DNA (879bp) protein (293aa)
Pyruvate dehydrogenase beta subunit {ECO:0000313|EMBL:CBH25103.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CBH25103.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Pyruvate dehydrogenase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAP8_SALRM
bkdA2; Pyruvate dehydrogenase beta subunit
Displaying 28 items

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