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sw_7_scaffold_143

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_143_1

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comp(258..938)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X8H4_CELAD
Uncharacterized protein {ECO:0000313|EMBL:KKN70164.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
sw_7_scaffold_143_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1140..2828)
DNA (1689bp) protein (563aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ABC44349.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ABC44349.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2E1_SALRD
pruA; 1-pyrroline-5-carboxylate dehydrogenase
sw_7_scaffold_143_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3050..4279
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24637.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_143_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4398..4910
DNA (513bp) protein (171aa)
Peroxiredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9D1_SALRM
bcp; peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:CBH24636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_7_scaffold_143_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5162..6136)
DNA (975bp) protein (325aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C9_SALRM
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase
sw_7_scaffold_143_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6186..7220)
DNA (1035bp) protein (345aa)
HTH-type transcriptional regulator celR
HTH-type transcriptional regulator celR; K02529 LacI family transcriptional regulator id=24659464 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HTH-type transcriptional regulator celR {ECO:0000313|EMBL:ABC45871.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_7_scaffold_143_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7269..8108)
DNA (840bp) protein (280aa)
hypothetical protein
hypothetical protein id=24659463 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24632.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_143_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8465..9835
DNA (1371bp) protein (457aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
riboflavin-specific deaminase/GTP cyclohydrolase II
riboflavin-specific deaminase/GTP cyclohydrolase II id=24659462 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_143_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9893..10942
DNA (1050bp) protein (350aa)
Putative zinc-binding dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C5_SALRM
zinc-binding dehydrogenase
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CBH24630.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_7_scaffold_143_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10983..11351
DNA (369bp) protein (123aa)
Putative 6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:CBH24629.1}; EC=4.2.3.12 {ECO:0000313|EMBL:CBH24629.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Putative 6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C4_SALRM
ygcM; 6-pyruvoyl tetrahydrobiopterin synthase
sw_7_scaffold_143_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11381..12301
DNA (921bp) protein (307aa)
hypothetical protein
hypothetical protein id=24659459 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24628.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_143_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(12330..13424)
DNA (1095bp) protein (365aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9C2_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH24627.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_7_scaffold_143_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(13653..14558)
DNA (906bp) protein (302aa)
phage integrase domain/SAM domain-containing protein
phage integrase domain/SAM domain-containing protein id=24659457 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phage integrase, N-terminal SAM-like domain protein {ECO:0000313|EMBL:ABC45087.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
sw_7_scaffold_143_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14750..15961)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9B9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24624.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_143_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(16050..16676)
DNA (627bp) protein (209aa)
cyclase superfamily protein; K07130 arylformamidase [EC:3.5.1.9] id=24659455 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Kynurenine formamidase {ECO:0000255|HAMAP-Rule:MF_01969}; Short=KFA {ECO:0000255|HAMAP-Rule:MF_01969};; Short=KFase {ECO:0000255|HAMAP-Rule:MF_01969};; EC=3.5.1.9 {ECO:0000255|HAMAP-Rule:MF_01969};; A
cyclase superfamily protein
sw_7_scaffold_143_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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17216..18742
DNA (1527bp) protein (509aa)
Beta-carotene ketolase {ECO:0000313|EMBL:CBH24621.1}; EC=1.14.99.- {ECO:0000313|EMBL:CBH24621.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
crtI; beta-carotene ketolase
crtI; beta-carotene ketolase id=24659453 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_143_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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18787..19530
DNA (744bp) protein (248aa)
Phytoene synthase-related protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9B5_SALRM
phytoene synthase-like protein
Phytoene synthase-related protein {ECO:0000313|EMBL:CBH24620.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_7_scaffold_143_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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19640..20569
DNA (930bp) protein (310aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=24659450 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
sw_7_scaffold_143_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(20735..22048)
DNA (1314bp) protein (438aa)
hypothetical protein
hypothetical protein id=24659449 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24617.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_143_20
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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comp(22131..23855)
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B39232
Putative periplasmic ligand-binding sensor domain protein Tax=RBG_16_Caldithrix_48_16_curated
sw_7_scaffold_143_21
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(23869..26337)
DNA (2469bp) protein (823aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B39232
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACF14181.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" so
Displaying 21 items

View Taxonomy
NameRatio
Salinibacter ruber
85.71%
marine sediment metagenome
4.76%
RBG_16_Caldithrix_48_16_curated
4.76%
Chloroherpeton thalassium
4.76%
Salinibacter ruber: 0.8571428571428571Chloroherpeton thalassium: 0.047619047619047616RBG_16_Caldithrix_48_16_curated: 0.047619047619047616marine sediment metagenome: 0.047619047619047616Salinibacter ruber