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sw_7_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_154_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

127..672
DNA (546bp) protein (182aa)
Carbonic anhydrase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S214_SALRD
paaY; carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:ABC44856.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_7_scaffold_154_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(713..1081)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24768.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_154_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1139..2587)
DNA (1449bp) protein (483aa)
hslU; ATP-dependent protease ATP-binding subunit HslU
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU id=24659603 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=309807 species="Bacteria; Bacteroid
sw_7_scaffold_154_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2657..3754)
DNA (1098bp) protein (366aa)
hypothetical protein
hypothetical protein id=24659602 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24766.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_154_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3854..4417)
DNA (564bp) protein (188aa)
hslV; ATP-dependent protease hslV; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=24659601 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=761659 specie
hslV; ATP-dependent protease hslV
sw_7_scaffold_154_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4569..5390)
DNA (822bp) protein (274aa)
mreC; Rod shape-determining protein MreC
mreC; Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC id=24659600 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
sw_7_scaffold_154_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5451..6458)
DNA (1008bp) protein (336aa)
mreB; MreB/Mrl family cell shape determining protein
mreB; MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins id=24659599 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:CBH24763.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" s
sw_7_scaffold_154_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6813..8399)
DNA (1587bp) protein (529aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q7_SALRM
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
sw_7_scaffold_154_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8546..9202)
DNA (657bp) protein (219aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBH24761.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBH24761.1};; 5'-phosphoribosy
Phosphoribosylglycinamide formyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q6_SALRM
purN; phosphoribosylglycinamide formyltransferase
sw_7_scaffold_154_10
unknown

Not on your lists

10027..10239
DNA (213bp) protein (71aa)

This feature has no annotations

sw_7_scaffold_154_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10461..10679
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J5R3_NOSP7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
hypothetical protein
sw_7_scaffold_154_12
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10676..10945
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B39760
Uncharacterized protein {ECO:0000313|EMBL:GAN33472.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="
hypothetical protein
sw_7_scaffold_154_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10981..11661)
DNA (681bp) protein (227aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CBH24758.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBH24758.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphoglycolate phosphatase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q3_SALRM
gph; phosphoglycolate phosphatase
sw_7_scaffold_154_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11960..14743
DNA (2784bp) protein (928aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
sw_7_scaffold_154_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14864..16180
DNA (1317bp) protein (439aa)
zinc protease; K07263 zinc protease [EC:3.4.24.-] id=24659593 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc protease {ECO:0000313|EMBL:CBH24755.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24755.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
protease
sw_7_scaffold_154_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16512..17576
DNA (1065bp) protein (355aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
sw_7_scaffold_154_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17586..18266)
DNA (681bp) protein (227aa)
PspC domain-containing protein
PspC domain-containing protein id=24659591 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_7_scaffold_154_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18470..19072)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
sw_7_scaffold_154_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


19401..20786
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
sw_7_scaffold_154_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


21133..21786
DNA (654bp) protein (218aa)
rpsP; 30S ribosomal protein S16
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_7_scaffold_154_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21816..22409
DNA (594bp) protein (198aa)
rimM; 16S rRNA processing protein RimM
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=24659587 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
sw_7_scaffold_154_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22481..23194
DNA (714bp) protein (238aa)
trmD; tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24659586 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; EC=2.1.1.228 {ECO:0000255|HAMAP-Rule:MF_00605};; M1G-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltr
trmD; tRNA (guanine-N1)-methyltransferase
sw_7_scaffold_154_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


23264..23620
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=2 Tax=Salinibacter ruber RepID=RL19_SALRD
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_7_scaffold_154_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23702..24514
DNA (813bp) protein (271aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_154_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24566..25030
DNA (465bp) protein (155aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
sw_7_scaffold_154_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25127..26362
DNA (1236bp) protein (412aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
sw_7_scaffold_154_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26402..28477)
DNA (2076bp) protein (692aa)
Lysyl endopeptidase [Precursor] {ECO:0000313|EMBL:CBH24743.1}; EC=3.4.21.50 {ECO:0000313|EMBL:CBH24743.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Lysyl endopeptidase [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N8_SALRM
prpL; Lysyl endopeptidase
sw_7_scaffold_154_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28511..29020)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S240_SALRD
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
sw_7_scaffold_154_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29230..30369)
DNA (1140bp) protein (380aa)
Phosphoribosylaminoimidazole carboxylase ATPase-subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N6_SALRM
purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
sw_7_scaffold_154_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30519..33260)
DNA (2742bp) protein (914aa)
DNA translocase ftsK n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9N5_SALRM
DNA translocase ftsK {ECO:0000313|EMBL:CBH24740.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
ftsK; DNA translocase ftsK
Displaying items 1-30 of 39 in total

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