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sw_7_scaffold_239

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_239_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..790)
DNA (789bp) protein (263aa)
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase {ECO:0000313|EMBL:ACY47724.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ACY47724.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
Membrane dipeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGT9_RHOM4
sw_7_scaffold_239_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(926..2026)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA23_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24878.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_239_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2031..2882)
DNA (852bp) protein (284aa)
Beta-lactamase {ECO:0000313|EMBL:EON76014.1}; EC=3.5.2.6 {ECO:0000313|EMBL:EON76014.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclo
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003690ED4
beta-lactamase
sw_7_scaffold_239_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3211..4641)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68859.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
sw_7_scaffold_239_5
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4701..7799)
DNA (3099bp) protein (1033aa)
TonB-dependent receptor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ86_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:ELR68860.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SusC/RagA family TonB-linked outer membrane protein
sw_7_scaffold_239_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7991..9547
DNA (1557bp) protein (519aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
sw_7_scaffold_239_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9564..10544)
DNA (981bp) protein (327aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:CBH24880.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Aspartokinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA25_SALRM
dapG; aspartate kinase
sw_7_scaffold_239_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10758..11240
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S1R1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24886.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_239_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11298..12704)
DNA (1407bp) protein (469aa)
phrB; deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] id=24659716 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ABC46273.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ABC46273.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
phrB; deoxyribodipyrimidine photolyase
sw_7_scaffold_239_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12815..14167)
DNA (1353bp) protein (451aa)
gltP; sodium:dicarboxylate symporter
gltP; sodium:dicarboxylate symporter id=24659717 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Proton/glutamate symporter {ECO:0000313|EMBL:ABC45627.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_7_scaffold_239_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14516..16558)
DNA (2043bp) protein (681aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
DNA-directed RNA polymerase subunit beta' n=2 Tax=Salinibacter ruber RepID=RPOC_SALRD
rpoC; DNA-directed RNA polymerase subunit beta'
sw_7_scaffold_239_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16539..18821)
DNA (2283bp) protein (761aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta'
sw_7_scaffold_239_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18913..22737)
DNA (3825bp) protein (1275aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=24659720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
rpoB; DNA-directed RNA polymerase subunit beta
sw_7_scaffold_239_14
unknown

Not on your lists

22999..23130
DNA (132bp) protein (44aa)

This feature has no annotations

sw_7_scaffold_239_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(23243..23626)
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_7_scaffold_239_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(23778..24314)
DNA (537bp) protein (179aa)
rplJ; 50S ribosomal protein L10
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24659722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_7_scaffold_239_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24370..25083)
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=2 Tax=Salinibacter ruber RepID=RL1_SALRD
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_7_scaffold_239_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(25210..25650)
DNA (441bp) protein (147aa)
50S ribosomal protein L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=24659724 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_7_scaffold_239_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25770..26327)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=2 Tax=Salinibacter ruber RepID=D5HA42_SALRM
nusG; transcription termination/antitermination factor NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
sw_7_scaffold_239_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26394..26660)
DNA (267bp) protein (89aa)
Protein translocase subunit SecE n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1P9_SALRD
Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_7_scaffold_239_trna_1
unknown

Not on your lists

comp(26703..26776)
DNA (74bp)
transferRNA
sw_7_scaffold_239_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26867..27067)
DNA (201bp) protein (67aa)
Elongation factor Tu n=4 Tax=Salinibacter ruber RepID=EFTU_SALRD
tuf; translation elongation factor EF-Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
Displaying 22 items

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