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sw_7_scaffold_243

Search features with annotation key words

Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_243_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..1071)
DNA (1071bp) protein (357aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACY47968.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
sw_7_scaffold_243_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1367..1954
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003718161
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACY47967.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
sw_7_scaffold_243_3
unknown

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2033..2293
DNA (261bp) protein (87aa)

This feature has no annotations

sw_7_scaffold_243_4
uncultured Rhizobium sp. HF0500_35F13, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2319..2831)
DNA (513bp) protein (171aa)
arylsulfatase (EC:3.1.6.1)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037E3611
Arylsulfatase A and related enzymes {ECO:0000313|EMBL:ADI22900.1}; Flags: Fragment;; TaxID=723627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte
sw_7_scaffold_243_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3122..6067
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037E6A36
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:CCH56659.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
membrane-bound dehydrogenase domain-containing protein
sw_7_scaffold_243_6
unknown

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comp(5990..6301)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_7_scaffold_243_trna_1
unknown

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comp(6379..6452)
DNA (74bp)
transferRNA
sw_7_scaffold_243_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6655..7638
DNA (984bp) protein (328aa)
hypothetical protein id=24659677 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:ABC46070.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_7_scaffold_243_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7686..8057
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24842.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_243_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8111..8929
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ABC46108.1}; EC=2.7.7.41 {ECO:0000313|EMBL:ABC46108.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Phosphatidate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1U8_SALRD
cdsA; phosphatidate cytidylyltransferase
sw_7_scaffold_243_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9151..9357
DNA (207bp) protein (69aa)
hypothetical protein
hypothetical protein id=24659674 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45955.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_243_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9736..11688
DNA (1953bp) protein (651aa)
mutL; DNA mismatch repair protein mutL; K03572 DNA mismatch repair protein MutL id=24659673 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
mutL; DNA mismatch repair protein mutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
sw_7_scaffold_243_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11764..12603)
DNA (840bp) protein (280aa)
Cytochrome c, class I n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF52_RHOM4
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ACY49308.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
sw_7_scaffold_243_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12712..14133
DNA (1422bp) protein (474aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
mesJ; cell cycle protein MesJ
sw_7_scaffold_243_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14195..14782
DNA (588bp) protein (196aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ABC44161.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ABC44161.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V2_SALRD
hpt; hypoxanthine phosphoribosyltransferase
sw_7_scaffold_243_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14975..16066
DNA (1092bp) protein (364aa)
Asparaginase {ECO:0000313|EMBL:CBH24837.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBH24837.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
Asparaginase n=2 Tax=Salinibacter ruber RepID=D5H9Y2_SALRM
ansA; asparaginase
sw_7_scaffold_243_16
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

16147..17301
DNA (1155bp) protein (385aa)
indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEZ7_9SPIO
sw_7_scaffold_243_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17342..18751)
DNA (1410bp) protein (470aa)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HA
Tryptophanase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y1_SALRM
tnaA; tryptophanase
sw_7_scaffold_243_18
unknown

Not on your lists

comp(18906..18998)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_7_scaffold_243_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19508..19621)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H908_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24513.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 20 items

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