ggKbase home page

sw_7_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 71 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_263_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

273..1931
DNA (1659bp) protein (553aa)
sulfatase n=1 Tax=Flexithrix dorotheae RepID=UPI000382D573
sulfatase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
sulfatase
sw_7_scaffold_263_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2174..2437
DNA (264bp) protein (88aa)
hypothetical protein, partial n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003819B0B
twin-arginine translocation pathway signal Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
oxidoreductase
sw_7_scaffold_263_3
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2504..2938
DNA (435bp) protein (145aa)
PfkB domain protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0X4_TERSS
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADV82265.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-185
sw_7_scaffold_263_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2960..4027
DNA (1068bp) protein (356aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000313|EMBL:CBH25158.1}; EC=4.1.2.40 {ECO:0000313|EMBL:CBH25158.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Tagatose 1,6-diphosphate aldolase n=2 Tax=Salinibacter ruber RepID=D5HAV3_SALRM
lacD; Tagatose 1,6-diphosphate aldolase
sw_7_scaffold_263_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4097..5032
DNA (936bp) protein (312aa)
Glucosamine--fructose-6-phosphateaminotransferase {ECO:0000313|EMBL:CBH25157.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CBH25157.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Glucosamine--fructose-6-phosphateaminotransferase n=2 Tax=Salinibacter ruber RepID=D5HAV2_SALRM
glmS; glucosamine--fructose-6-phosphate aminotransferase
sw_7_scaffold_263_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4974..6041
DNA (1068bp) protein (356aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25156.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657947 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_263_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6046..6180
DNA (135bp) protein (45aa)
putP; Na+/proline symporter
putP; Na+/proline symporter id=24657946 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Na+/proline symporter {ECO:0000313|EMBL:CBH25155.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
sw_7_scaffold_263_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6480..7571
DNA (1092bp) protein (364aa)
Fructose-1,6-bisphosphatase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 2 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisph
Fructose-1,6-bisphosphatase class 1 2 n=2 Tax=Salinibacter ruber RepID=F16A2_SALRD
fbp; fructose-1,6-bisphosphatase
sw_7_scaffold_263_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7681..8958)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBH24984.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(
Serine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC9_SALRM
serS; seryl-tRNA synthetase
sw_7_scaffold_263_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9164..10072)
DNA (909bp) protein (303aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CBH24983.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CBH24983.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
dTDP-4-dehydrorhamnose reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC8_SALRM
rfbD; dTDP-4-dehydrorhamnose reductase
sw_7_scaffold_263_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10115..10624)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24982.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_263_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10685..11965)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24980.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_263_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12015..13898)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_263_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14053..15234
DNA (1182bp) protein (394aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC3_SALRM
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
sw_7_scaffold_263_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15261..16703
DNA (1443bp) protein (481aa)
Membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=24659806 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Membrane-associated zinc metalloprotease
sw_7_scaffold_263_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16926..17750
DNA (825bp) protein (275aa)
uppS; undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] id=24659805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
uppS; undecaprenyl diphosphate synthase
sw_7_scaffold_263_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17986..20523
DNA (2538bp) protein (846aa)
Surface antigen (D15): Surface antigen variable number n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAC0_SALRM
Surface antigen (D15): Surface antigen variable number {ECO:0000313|EMBL:CBH24975.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
Surface antigen
sw_7_scaffold_263_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20564..21196
DNA (633bp) protein (211aa)
Outer membrane protein OmpH, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1H4_SALRD
outer membrane protein OmpH
Outer membrane protein OmpH, putative {ECO:0000313|EMBL:ABC44454.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
sw_7_scaffold_263_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21274..21873
DNA (600bp) protein (200aa)
outer membrane lipoprotein
outer membrane lipoprotein id=24659802 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein (OmpH-like) {ECO:0000313|EMBL:ABC44759.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
sw_7_scaffold_263_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21969..22802
DNA (834bp) protein (278aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB7_SALRM
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
sw_7_scaffold_263_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23309..25108
DNA (1800bp) protein (600aa)
Choline dehydrogenase {ECO:0000313|EMBL:CBH25669.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CBH25669.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Choline dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB4_SALRM
beta; choline dehydrogenase
sw_7_scaffold_263_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25131..25829
DNA (699bp) protein (233aa)
Tat pathway signal sequence domain-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH69_RHOM4
Tat pathway signal sequence domain-containing protein
Tat pathway signal sequence domain-containing protein {ECO:0000313|EMBL:ACY49658.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
sw_7_scaffold_263_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25916..26737
DNA (822bp) protein (274aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=761659 spec
5'-nucleotidase SurE n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB6_SALRM
surE; 5'-nucleotidase surE
sw_7_scaffold_263_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27007..27279
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45563.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_263_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27481..28509)
DNA (1029bp) protein (343aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB4_SALRM
transporter, small conductance mechanosensitive ion channel (MscS) family
Transporter, small conductance mechanosensitive ion channel (MscS) family {ECO:0000313|EMBL:CBH24969.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
sw_7_scaffold_263_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28548..29093)
DNA (546bp) protein (182aa)
Bifunctional protein FolD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB3_SALRM
folD; FolD bifunctional protein
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_7_scaffold_263_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29039..29404)
DNA (366bp) protein (122aa)
FolD bifunctional protein; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24659797 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includ
FolD bifunctional protein
sw_7_scaffold_263_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29652..30737
DNA (1086bp) protein (362aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=24659796 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ABC46049.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ABC46049.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
asd; aspartate-semialdehyde dehydrogenase
sw_7_scaffold_263_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30809..31330
DNA (522bp) protein (174aa)
hypothetical protein id=24659795 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_263_trna_1
unknown

Not on your lists

31401..31473
DNA (73bp)
transferRNA
Displaying items 1-30 of 71 in total

View Taxonomy