ggKbase home page

sw_7_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_28_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..649)
DNA (648bp) protein (216aa)
Probable oxidoreductase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZJ9_SALRD
oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:ABC43917.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(711..1487)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25672.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1547..2089)
DNA (543bp) protein (181aa)
Oxidoreductase, Gfo/Idh/MocA family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZK1_SALRD
Gfo/Idh/MocA family oxidoreductase
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:ABC45811.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_7_scaffold_28_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3015..3890)
DNA (876bp) protein (292aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACY48619.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
sw_7_scaffold_28_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3935..4681)
DNA (747bp) protein (249aa)
Crp/FNR family transcriptional regulator n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF99_RHOMR
Crp/FNR family transcriptional regulator
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:AEN73620.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodo
sw_7_scaffold_28_6
unknown

Not on your lists

comp(4698..4868)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_7_scaffold_28_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5133..5423
DNA (291bp) protein (97aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44538.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24657045 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_28_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5518..6882)
DNA (1365bp) protein (455aa)
hypothetical protein
hypothetical protein id=24658474 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46351.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7039..7644)
DNA (606bp) protein (202aa)
hypothetical protein
hypothetical protein id=24658473 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44139.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7641..8150)
DNA (510bp) protein (170aa)
rfaY; RNA polymerase ECF-type sigma factor
rfaY; RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658472 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABC46204.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_7_scaffold_28_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8353..9618
DNA (1266bp) protein (422aa)
hypothetical protein id=24658471 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45982.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9717..10409
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB0_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25665.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_7_scaffold_28_13
unknown

Not on your lists

comp(10315..10824)
DNA (510bp) protein (170aa)

This feature has no annotations

sw_7_scaffold_28_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10862..11152)
DNA (291bp) protein (97aa)
hypothetical protein
hypothetical protein id=24658467 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46279.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11471..12601
DNA (1131bp) protein (377aa)
tRNA-dihydrouridine synthase B {ECO:0000313|EMBL:CBH25662.1}; EC=1.-.-.- {ECO:0000313|EMBL:CBH25662.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
tRNA-dihydrouridine synthase B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCA7_SALRM
dusB; tRNA-dihydrouridine synthase B
sw_7_scaffold_28_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12767..13207
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein id=24658453 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25647.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_17
unknown

Not on your lists

13325..13531
DNA (207bp) protein (69aa)

This feature has no annotations

sw_7_scaffold_28_18
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

13592..13903
DNA (312bp) protein (104aa)
Putative uncharacterized protein id=3523688 bin=GWF2_Melainabacteria_37_15 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein Tax=GWF2_Melainabacteria_37_15_curated
hypothetical protein
sw_7_scaffold_28_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13900..14112
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B38BA0
Uncharacterized protein {ECO:0000313|EMBL:KHD08110.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
sw_7_scaffold_28_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14193..14681
DNA (489bp) protein (163aa)
hypothetical protein
hypothetical protein id=24658452 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC46188.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14672..16117)
DNA (1446bp) protein (482aa)
hypothetical protein
hypothetical protein id=24658451 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein family (UPF0089) {ECO:0000313|EMBL:ABC46165.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_7_scaffold_28_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16436..17653)
DNA (1218bp) protein (406aa)
hypothetical protein
hypothetical protein id=24658450 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45354.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17785..18717)
DNA (933bp) protein (311aa)
hypothetical protein
hypothetical protein id=24658449 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25640.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18768..19544)
DNA (777bp) protein (259aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN1_SALRD
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC45736.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_7_scaffold_28_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19717..20469)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HC83_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46044.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20631..22010
DNA (1380bp) protein (460aa)
DNA repair protein radA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN3_SALRD
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_7_scaffold_28_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22304..22909
DNA (606bp) protein (202aa)
rpoE; RNA polymerase sigma-E factor
rpoE; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658445 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-E factor {ECO:0000313|EMBL:CBH25636.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_7_scaffold_28_28
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22960..23526
DNA (567bp) protein (189aa)
id=24658444 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24658444 bin=Salinibacter_ruber tax=Salinibacter_ruber
sw_7_scaffold_28_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23593..24330
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZN5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46159.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_28_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24503..25789
DNA (1287bp) protein (429aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CBH25634.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CBH25634.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HC79_SALRM
amiB; N-acetylmuramoyl-L-alanine amidase
Displaying items 1-30 of 40 in total

View Taxonomy