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sw_7_scaffold_354

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_354_1
unknown

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3..260
DNA (258bp) protein (86aa)

This feature has no annotations

sw_7_scaffold_354_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(235..3582)
DNA (3348bp) protein (1116aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
two-component sensor histidine kinase
two-component sensor histidine kinase id=24657981 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_354_trna_1
unknown

Not on your lists

comp(4501..4573)
DNA (73bp)
transferRNA
sw_7_scaffold_354_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4643..5317)
DNA (675bp) protein (225aa)
DedA family protein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S212_SALRD
dedA; DedA family protein
Putative DedA family protein {ECO:0000313|EMBL:CBH24772.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_7_scaffold_354_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5349..5822)
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase; K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] id=24659609 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00107}; Short=MECDP-synthase {ECO:0000255|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000255|HAMAP-Rule:MF_00107}
sw_7_scaffold_354_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5852..6604)
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9R9_SALRM
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
sw_7_scaffold_354_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6661..7710)
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Salinibacter ruber RepID=D5H9S0_SALRM
queuosine biosynthesis protein
sw_7_scaffold_354_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7861..8817)
DNA (957bp) protein (319aa)
hypothetical protein
hypothetical protein id=24659612 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45691.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8960..10678)
DNA (1719bp) protein (573aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CBH24777.1}; EC=6.3.5.- {ECO:0000313|EMBL:CBH24777.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S2_SALRM
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A
sw_7_scaffold_354_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10758..11174)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SGY8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24779.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11235..12488)
DNA (1254bp) protein (418aa)
ylnA; anion permease
ylnA; anion permease; K03306 inorganic phosphate transporter, PiT family id=24659615 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Anion permease {ECO:0000313|EMBL:ABC46004.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain
sw_7_scaffold_354_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12777..14420)
DNA (1644bp) protein (548aa)
Peptide chain release factor 3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9S7_SALRM
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
sw_7_scaffold_354_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14568..15044)
DNA (477bp) protein (159aa)
hypothetical protein id=24659617 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24783.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15041..15847)
DNA (807bp) protein (269aa)
Uncharacterized ACR, COG1434 family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S202_SALRD
hypothetical protein
Uncharacterized ACR, COG1434 family {ECO:0000313|EMBL:ABC44208.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_7_scaffold_354_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15953..17191)
DNA (1239bp) protein (413aa)
hypothetical protein
hypothetical protein id=24659620 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24787.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17802..18953
DNA (1152bp) protein (384aa)
Anthranilate synthase component I {ECO:0000313|EMBL:CBH24788.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CBH24788.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
trpE; anthranilate synthase; K01657 anthranilate synthase component I [EC:4.1.3.27] id=24659621 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
trpE; anthranilate synthase component I
sw_7_scaffold_354_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19070..19552
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24659622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19603..20211
DNA (609bp) protein (203aa)
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=24659623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase
sw_7_scaffold_354_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20223..20561
DNA (339bp) protein (113aa)
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=24659623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
trpS; tryptophanyl-tRNA synthetase
sw_7_scaffold_354_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

20593..21069
DNA (477bp) protein (159aa)
S23 ribosomal protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KK19_CYAP7
S23 ribosomal protein Tax=RBG_16_Chloroflexi_63_12_curated
S23 ribosomal protein
sw_7_scaffold_354_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21114..21716
DNA (603bp) protein (201aa)
pabA; para-aminobenzoate synthase glutamine amidotransferase component ii; K01658 anthranilate synthase component II [EC:4.1.3.27] id=24659624 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Para-aminobenzoate synthase glutamine amidotransferase, component ii {ECO:0000313|EMBL:CBH24791.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CBH24791.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
pabA; para-aminobenzoate synthase glutamine amidotransferase component ii
sw_7_scaffold_354_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21755..22789
DNA (1035bp) protein (345aa)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Anthranilate phosphoribosyltransferase n=2 Tax=Salinibacter ruber RepID=TRPD_SALRD
trpD; anthranilate phosphoribosyltransferase
sw_7_scaffold_354_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23060..23872
DNA (813bp) protein (271aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=24659626 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:
trpC; Indole-3-glycerol phosphate synthase
sw_7_scaffold_354_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24110..24760
DNA (651bp) protein (217aa)
trpF; N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] id=24659627 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
trpF; N-(5'phosphoribosyl)anthranilate isomerase
sw_7_scaffold_354_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24874..26094
DNA (1221bp) protein (407aa)
trpB2; tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=24659628 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1};; TaxID=761659 species="Bacter
trpB2; tryptophan synthase subunit beta
sw_7_scaffold_354_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26208..27056
DNA (849bp) protein (283aa)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Tryptophan synthase alpha chain n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=TRPA_SALRD
trpA; tryptophan synthase subunit alpha
sw_7_scaffold_354_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27244..28401
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9U2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24797.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28401..28838
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9U3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24798.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_354_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28991..30940)
DNA (1950bp) protein (650aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CBH24799.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBH24799.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
ATP-dependent DNA helicase RecQ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9U4_SALRM
recQ; ATP-dependent DNA helicase RecQ
sw_7_scaffold_354_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31097..32131
DNA (1035bp) protein (345aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
Displaying items 1-30 of 40 in total

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