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sw_7_scaffold_4258

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_4258_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..196
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6K2_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23657.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(554..1105)
DNA (552bp) protein (184aa)
HIT domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3N3_SALRD
HIT domain-containing protein
HIT domain protein {ECO:0000313|EMBL:ABC45310.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_7_scaffold_4258_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1258..1881
DNA (624bp) protein (208aa)
hypothetical protein
hypothetical protein; K07053 id=24658990 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24187.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1928..2401
DNA (474bp) protein (158aa)
ribE; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=24658991 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ribE; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_7_scaffold_4258_trna_1
unknown

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2637..2710
DNA (74bp)
transferRNA
sw_7_scaffold_4258_trna_2
unknown

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2751..2825
DNA (75bp)
transferRNA
sw_7_scaffold_4258_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2899..3228)
DNA (330bp) protein (110aa)
Glycosyl transferase, group 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H835_SALRM
rfaG; group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBH24190.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_7_scaffold_4258_6
unknown

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3412..3648
DNA (237bp) protein (79aa)

This feature has no annotations

sw_7_scaffold_4258_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3981..4202)
DNA (222bp) protein (74aa)
hypothetical protein
hypothetical protein id=24658993 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45424.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4494..5039
DNA (546bp) protein (182aa)
comF; competence protein F
comF; competence protein F id=24658994 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Competence protein F {ECO:0000313|EMBL:ABC45221.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
sw_7_scaffold_4258_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5140..5694)
DNA (555bp) protein (185aa)
msrA; peptide methionine sulfoxide reductase MsrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] id=24658995 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
msrA; peptide methionine sulfoxide reductase MsrA
sw_7_scaffold_4258_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5949..6377
DNA (429bp) protein (143aa)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=2 Tax=Salinibacter ruber RepID=NDK_SALRD
ndk; nucleoside diphosphate kinase
sw_7_scaffold_4258_11
unknown

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comp(6338..6673)
DNA (336bp) protein (112aa)

This feature has no annotations

sw_7_scaffold_4258_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7060..7542
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H840_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24195.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7536..7796)
DNA (261bp) protein (87aa)
hypothetical protein
hypothetical protein id=24658998 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24196.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_14
unknown

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comp(7939..8565)
DNA (627bp) protein (209aa)

This feature has no annotations

sw_7_scaffold_4258_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9380..9847
DNA (468bp) protein (156aa)
hypothetical protein
hypothetical protein id=24659000 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45309.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_4258_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9989..10894)
DNA (906bp) protein (302aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Salinibacter ruber RepID=DAPA_SALRD
dapA; dihydrodipicolinate synthase
sw_7_scaffold_4258_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10940..11695)
DNA (756bp) protein (252aa)
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=24659002 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; dihydrodipicolinate reductase
sw_7_scaffold_4258_trna_3
unknown

Not on your lists

11750..11822
DNA (73bp)
transferRNA
sw_7_scaffold_4258_18
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11986..13449
DNA (1464bp) protein (488aa)
N-acetylglucosamine-6-sulfatase (EC:3.1.6.14) Tax=RBG_13_Planctomycetes_62_9_curated
Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase) n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S5X9_9PLAN
acetylglucosamine-6-sulfatase
sw_7_scaffold_4258_19
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(13478..14533)
DNA (1056bp) protein (352aa)
Sulphatase-modifying factor protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB82_RUNSL
sulfatase-modifying factor protein
Sulphatase-modifying factor protein {ECO:0000313|EMBL:AEI46583.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (stra
Displaying 22 items

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