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sw_7_scaffold_589

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_589_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..889
DNA (888bp) protein (296aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7D7_SALRM
hisS; histidyl-tRNA synthetase
sw_7_scaffold_589_2
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(997..1551)
DNA (555bp) protein (185aa)
PEGA domain-containing protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZZJ6_ORNRL
Uncharacterized protein {ECO:0000313|EMBL:KGN97255.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicani
PEGA domain-containing protein
sw_7_scaffold_589_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2084..2398
DNA (315bp) protein (105aa)
hypothetical protein id=24657715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23944.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_589_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2420..2893)
DNA (474bp) protein (158aa)
Amine oxidase, flavin-containing superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E0_SALRM
amine oxidase
Amine oxidase, flavin-containing superfamily {ECO:0000313|EMBL:CBH23945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_7_scaffold_589_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2838..3689)
DNA (852bp) protein (284aa)
amine oxidase
amine oxidase id=24657716 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Amine oxidase, flavin-containing superfamily {ECO:0000313|EMBL:ABC45680.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
sw_7_scaffold_589_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3673..5202)
DNA (1530bp) protein (510aa)
hypothetical protein
hypothetical protein id=24657717 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44295.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_589_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5332..6705)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYB7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY24590.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
sw_7_scaffold_589_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6808..9357)
DNA (2550bp) protein (850aa)
Putative TonB-dependent outer membrane protein {ECO:0000313|EMBL:ABC44624.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
TonB-dependent outer membrane protein id=24657719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB-dependent outer membrane protein
sw_7_scaffold_589_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9410..9655)
DNA (246bp) protein (82aa)
hypothetical protein
hypothetical protein id=24657720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44003.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_589_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9922..11631)
DNA (1710bp) protein (570aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBH23950.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7E5_SALRM
glgB; 1,4-alpha-glucan-branching protein
sw_7_scaffold_589_11
unknown

Not on your lists

11790..13142
DNA (1353bp) protein (451aa)

This feature has no annotations

sw_7_scaffold_589_12

Not on your lists

13155..14948
DNA (1794bp) protein (598aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XW65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34780.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sw_7_scaffold_589_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15215..17206)
DNA (1992bp) protein (664aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000255|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000255|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000255|HAMAP-Rule:MF_02124};; (1->4)-alph
glycosidase id=24657723 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
alpha amylase family protein
sw_7_scaffold_589_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17499..19682
DNA (2184bp) protein (728aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489, ECO:0000313|EMBL:CBH23953.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroid
glgX; glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] id=24657724 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
glgX; glycogen debranching protein GlgX
sw_7_scaffold_589_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19796..20785)
DNA (990bp) protein (330aa)
Integrase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7J1_SALRM
integrase
Integrase {ECO:0000313|EMBL:CBH23996.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).
sw_7_scaffold_589_16
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21219..22313
DNA (1095bp) protein (365aa)
Pyrrolo-quinoline quinone n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WJ47_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY49256.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 1
PQQ repeat protein
sw_7_scaffold_589_17
unknown

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22589..23209
DNA (621bp) protein (207aa)

This feature has no annotations

sw_7_scaffold_589_18
unknown

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23459..24121
DNA (663bp) protein (221aa)

This feature has no annotations

sw_7_scaffold_589_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24639..24923
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H6Z0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44753.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_589_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25250..25558
DNA (309bp) protein (103aa)
GAF domain-containing protein
GAF domain-containing protein; K07170 GAF domain-containing protein id=24657565 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GAF domain protein {ECO:0000313|EMBL:ABC45163.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_7_scaffold_589_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25904..28168
DNA (2265bp) protein (755aa)
permease
Putative permease domain protein {ECO:0000313|EMBL:ABC45975.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
permease; K02004 putative ABC transport system permease protein id=24657564 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_7_scaffold_589_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28218..28403
DNA (186bp) protein (62aa)
hypothetical protein id=24657563 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45771.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_7_scaffold_589_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28684..28875
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23791.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 23 items

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