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sw_7_scaffold_1187

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1187_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..450)
DNA (450bp) protein (150aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RS79_HALTV
mandelate racemase/muconate lactonizing protein
sw_7_scaffold_1187_2
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(450..1379)
DNA (930bp) protein (310aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937, ECO:0000313|EMBL:EMA38715.1}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M2T4_9EURY
1,4-dihydroxy-2-naphthoate octaprenyltransferase
sw_7_scaffold_1187_3
unknown

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comp(1449..1682)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_7_scaffold_1187_4
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1739..2671)
DNA (933bp) protein (311aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934, ECO:0000313|EMBL:ELZ
menB; naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IM04_9EURY
sw_7_scaffold_1187_5
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2681..3127
DNA (447bp) protein (149aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VMY5_9EURY
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:ELY38352.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natr
heat shock protein DnaJ domain protein
sw_7_scaffold_1187_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3111..5003)
DNA (1893bp) protein (631aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; K02551 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] id=24641298 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
menD; 2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (EC:2.2.1.9)
sw_7_scaffold_1187_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5000..6379)
DNA (1380bp) protein (460aa)
Isochorismate synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2U8_HALJB
isochorismate synthase
Isochorismate synthase {ECO:0000313|EMBL:ADJ15055.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
sw_7_scaffold_1187_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6495..6707
DNA (213bp) protein (71aa)
Surface glycoprotein n=1 Tax=Halogranum salarium B-1 RepID=J3JI03_9EURY
Surface glycoprotein {ECO:0000313|EMBL:EJN61449.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_7_scaffold_1187_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6704..7489)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKR4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46261.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_1187_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7486..8667)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43093.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_1187_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8770..9300
DNA (531bp) protein (177aa)
Thioredoxin 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2Y0_9EURY
Thioredoxin 2 {ECO:0000313|EMBL:EMA52231.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
trxA; thioredoxin
sw_7_scaffold_1187_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9305..10135
DNA (831bp) protein (277aa)
Cytochrome c biogenesis protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MGA9_9EURY
Cytochrome c biogenesis protein {ECO:0000313|EMBL:ERG88244.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
cytochrome c-type biogenesis protein
sw_7_scaffold_1187_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10431..10805
DNA (375bp) protein (125aa)
Transcription repressor CinR n=2 Tax=Halobacteriaceae RepID=L9YVK8_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32176.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_7_scaffold_1187_14
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10966..12291)
DNA (1326bp) protein (442aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=122748
Glutamyl-tRNA(Gln) amidotransferase subunit A n=4 Tax=Halorubrum RepID=M0CXE4_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
sw_7_scaffold_1187_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12292..12564)
DNA (273bp) protein (91aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halogranum salarium B-1 RepID=J3EYF0_9EURY
glutamyl-tRNA(Gln) amidotransferase subunit C
sw_7_scaffold_1187_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12807..13784
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=3 Tax=Haloarcula RepID=G0HV41_HALHT
tfb4; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_7_scaffold_1187_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13835..14314
DNA (480bp) protein (160aa)
NUDIX hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIQ8_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ22257.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
NUDIX hydrolase
sw_7_scaffold_1187_18
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14143..15327)
DNA (1185bp) protein (395aa)
Asparagine synthase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IQV1_9EURY
Asparagine synthase {ECO:0000313|EMBL:ELZ98412.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.
asnA; asparagine synthetase
sw_7_scaffold_1187_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15581..18211
DNA (2631bp) protein (877aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7F5_HALXS
sw_7_scaffold_1187_20
unknown

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comp(18476..19027)
DNA (552bp) protein (184aa)

This feature has no annotations

sw_7_scaffold_1187_21
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19194..19517
DNA (324bp) protein (108aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrial
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFM0_9EURY
hypothetical protein
sw_7_scaffold_1187_trna_1
unknown

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19567..19639
DNA (73bp)
transferRNA
sw_7_scaffold_1187_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19979..20488
DNA (510bp) protein (170aa)
kinase
hypothetical protein; K07028 id=24614747 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Kinase {ECO:0000313|EMBL:ESP88793.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellensis
sw_7_scaffold_1187_23
unknown

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comp(20510..20683)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 24 items

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