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sw_7_scaffold_234

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_234_1
unknown

Not on your lists

3..215
DNA (213bp) protein (71aa)

This feature has no annotations

sw_7_scaffold_234_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

267..764
DNA (498bp) protein (166aa)
hypothetical protein id=24615227 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ERH09366.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_234_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1400..4168)
DNA (2769bp) protein (923aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LNQ9_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobifo
SMC domain-containing protein
sw_7_scaffold_234_4
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4165..5181)
DNA (1017bp) protein (339aa)
Metallophosphoesterase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BUH3_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELZ14023.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DS
DNA repair exonuclease
sw_7_scaffold_234_5
unknown

Not on your lists

comp(5474..5638)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_7_scaffold_234_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5651..6388)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_234_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6516..7208)
DNA (693bp) protein (231aa)
Trans-aconitate 2-methyltransferase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7J4_9EURY
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:ELZ42973.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
trans-aconitate 2-methyltransferase
sw_7_scaffold_234_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7386..8561)
DNA (1176bp) protein (392aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JC97_HALVA
sw_7_scaffold_234_9
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8608..9033)
DNA (426bp) protein (142aa)
NUDIX hydrolase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M2G3_9EURY
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:EMA38585.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
sw_7_scaffold_234_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9292..9690
DNA (399bp) protein (133aa)
30S ribosomal protein S10 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDU1_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000313|EMBL:EMA31756.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source
ribosomal protein S10-like protein
sw_7_scaffold_234_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9691..10557)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UQP0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66254.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sw_7_scaffold_234_12
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10652..11938
DNA (1287bp) protein (429aa)
indole-3-acetyl-L-aspartic acid hydrolase (EC:3.5.1.-)
Indole-3-acetyl-L-aspartic acid hydrolase {ECO:0000313|EMBL:ADE03610.1}; EC=3.5.1.- {ECO:0000313|EMBL:ADE03610.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferac
Indole-3-acetyl-L-aspartic acid hydrolase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GXW6_HALVD
sw_7_scaffold_234_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11944..13329)
DNA (1386bp) protein (462aa)
Geranylgeranyl reductase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W3N9_9EURY
geranylgeranyl reductase
Geranylgeranyl reductase {ECO:0000313|EMBL:AGN00647.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1
sw_7_scaffold_234_14
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13383..13811)
DNA (429bp) protein (143aa)
Methylmalonyl-CoA epimerase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VZA1_9EURY
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ELY42524.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifacie
methylmalonyl-CoA epimerase
sw_7_scaffold_234_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13868..14269)
DNA (402bp) protein (134aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG60_9EURY
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:AHG04510.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. D
cupin
sw_7_scaffold_234_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14325..16004)
DNA (1680bp) protein (560aa)
Methylmalonyl-CoA mutase, large subunit n=2 Tax=Haloarcula hispanica RepID=G0HPY9_HALHT
methylmalonyl-CoA mutase
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:AJF26845.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_234_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16053..16646)
DNA (594bp) protein (198aa)
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Natronococcus occultus SP4 RepID=L0K293_9EURY
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AGB39412.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoco
sw_7_scaffold_234_18
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16808..17587
DNA (780bp) protein (260aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELY58047.1}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608, ECO:0000313|EMBL:ELY58047.1};; TaxID=1227497 species="Archaea; Eury
GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8Y6_9EURY
sw_7_scaffold_234_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17592..18746
DNA (1155bp) protein (385aa)
Putative zinc-binding dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6B2_9EURY
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:EMA53411.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
theronine dehydrogenase-like Zn-dependent dehydrogenase
sw_7_scaffold_234_20
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19195..19731)
DNA (537bp) protein (179aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0ID65_HALRX
hypothetical protein
sw_7_scaffold_234_21
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19937..20797
DNA (861bp) protein (287aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKF8_NATP1
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB31759.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (stra
sw_7_scaffold_234_22
unknown

Not on your lists

20868..21149
DNA (282bp) protein (94aa)

This feature has no annotations

sw_7_scaffold_234_23
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21146..21697
DNA (552bp) protein (184aa)
N-acetyltransferase GCN5 n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EFI7_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ45657.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.
N-acetyltransferase GCN5
sw_7_scaffold_234_24
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21712..22944)
DNA (1233bp) protein (411aa)
Squalene/phytoene synthase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WVH9_9EURY
Squalene/phytoene synthase {ECO:0000313|EMBL:ELY52358.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM
Squalene/phytoene synthase
sw_7_scaffold_234_25
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22995..24179
DNA (1185bp) protein (395aa)
Acyl-CoA dehydrogenase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PG87_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA68918.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.
acyl-CoA dehydrogenase
sw_7_scaffold_234_26
unknown

Not on your lists

comp(24494..24601)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 26 items

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