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sw_7_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_474_1
unknown

Not on your lists

3..164
DNA (162bp) protein (54aa)

This feature has no annotations

sw_7_scaffold_474_2
unknown

Not on your lists

comp(233..382)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_7_scaffold_474_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(634..2100)
DNA (1467bp) protein (489aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DME1_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ35324.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
amidohydrolase
sw_7_scaffold_474_4
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2106..2312)
DNA (207bp) protein (69aa)
XRE family transcriptional regulator n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XKF2_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:ELY62042.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeo
putative transcriptional regulator
sw_7_scaffold_474_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2326..2772)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037ACF9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46563.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_474_6
unknown

Not on your lists

3229..4011
DNA (783bp) protein (261aa)

This feature has no annotations

sw_7_scaffold_474_7
unknown

Not on your lists

comp(4001..4318)
DNA (318bp) protein (106aa)

This feature has no annotations

sw_7_scaffold_474_8
unknown

Not on your lists

4394..4543
DNA (150bp) protein (50aa)

This feature has no annotations

sw_7_scaffold_474_trna_1
unknown

Not on your lists

comp(4858..4941)
DNA (84bp)
transferRNA
sw_7_scaffold_474_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4970..5248)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU08_NATPD
psp operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48375.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_7_scaffold_474_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5245..5625)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D007_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELZ28836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
psp1; ribonuclease, PSP-type
sw_7_scaffold_474_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5674..6885)
DNA (1212bp) protein (404aa)
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LXC5_9EURY
Threonine dehydratase {ECO:0000313|EMBL:EMA36984.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_7_scaffold_474_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7060..8580
DNA (1521bp) protein (507aa)
MATE efflux family protein n=1 Tax=Halogranum salarium B-1 RepID=J3A2L0_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EJN59558.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
efflux protein, MATE family
sw_7_scaffold_474_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8637..10391)
DNA (1755bp) protein (585aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1132509 species="Archaea; Eury
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWQ7_9EURY
sw_7_scaffold_474_14
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10565..11287
DNA (723bp) protein (241aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
CTP-dependent riboflavin kinase (EC:2.7.1.161)
Riboflavin kinase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A5X3_9EURY
sw_7_scaffold_474_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11284..12120
DNA (837bp) protein (279aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1227465 specie
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E4H0_9EURY
3,4-dihydroxy-2-butanone 4-phosphate synthase
sw_7_scaffold_474_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12072..12971
DNA (900bp) protein (300aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA52400.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EMA52400.1};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6T7_9EURY
branched-chain amino acid aminotransferase, group I
sw_7_scaffold_474_17
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12972..13682)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51627.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_7_scaffold_474_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13888..14199
DNA (312bp) protein (104aa)
UPF0290 protein C475_07455 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0Q5_9EURY
cdp-diglyceride synthetase
UPF0290 protein Hbor_28390 {ECO:0000256|HAMAP-Rule:MF_01117}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="H
sw_7_scaffold_474_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14373..14918
DNA (546bp) protein (182aa)
pyrE1; orotate phosphoribosyltransferase (EC:2.4.2.10) id=24614189 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
orotate phosphoribosyltransferase
sw_7_scaffold_474_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15096..17057
DNA (1962bp) protein (654aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYT_NATPD
sw_7_scaffold_474_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17169..17492
DNA (324bp) protein (108aa)
Glutathione S-transferase domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1H0_9EURY
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:ELZ29295.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
glutaredoxin-like protein
sw_7_scaffold_474_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17536..18666)
DNA (1131bp) protein (377aa)
Putative HTH-type transcriptional regulatory protein F876_06285 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWH7_9EURY
Putative HTH-type transcriptional regulatory protein C474_11785 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
XRE family transcriptional regulator
sw_7_scaffold_474_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18717..19505
DNA (789bp) protein (263aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0J4_HALMD
hypothetical protein
sw_7_scaffold_474_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19457..19786
DNA (330bp) protein (110aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW01_9EURY
hypothetical protein
sw_7_scaffold_474_25
unknown

Not on your lists

19879..20628
DNA (750bp) protein (250aa)

This feature has no annotations

sw_7_scaffold_474_26
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20752..21939)
DNA (1188bp) protein (396aa)
Threonine synthase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W099_9EURY
Threonine synthase {ECO:0000313|EMBL:KDE58799.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
threonine synthase
sw_7_scaffold_474_27
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21939..22895)
DNA (957bp) protein (319aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CHT5_9EURY
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ELZ22188.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
Succinylglutamate desuccinylase/aspartoacylase
sw_7_scaffold_474_28
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22969..24201)
DNA (1233bp) protein (411aa)
TrkA-C domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPB0_HALUD
TrkA-C domain protein
TrkA-C domain protein {ECO:0000313|EMBL:ACV11697.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain
sw_7_scaffold_474_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24314..25456
DNA (1143bp) protein (381aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladapta
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXR7_9EURY
Displaying items 1-30 of 36 in total

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