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sw_7_scaffold_584

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_584_trna_1
unknown

Not on your lists

comp(32..116)
DNA (85bp)
transferRNA
sw_7_scaffold_584_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

273..785
DNA (513bp) protein (171aa)
Transcription factor of MBF1-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RWN1_HALTV
transcription factor of MBF1-like protein
Transcription factor of MBF1-like protein {ECO:0000313|EMBL:ADB61532.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_7_scaffold_584_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

967..2121
DNA (1155bp) protein (385aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1227455 species="Arch
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK0_9EURY
sw_7_scaffold_584_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2123..3682
DNA (1560bp) protein (520aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_0000
Argininosuccinate lyase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CTI4_9EURY
sw_7_scaffold_584_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

3744..3887
DNA (144bp) protein (48aa)
hypothetical protein; K05826 alpha-aminoadipate carrier protein LysW Tax=RBG_16_Bathyarchaeota_48_13_curated
lysine biosynthesis protein LysW
sw_7_scaffold_584_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3887..4708
DNA (822bp) protein (274aa)
Lysine biosynthesis protein LysX n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIT5_HALMO
Lysine biosynthesis protein LysX {ECO:0000313|EMBL:EMA44360.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
lysine biosynthesis protein LysX
sw_7_scaffold_584_6
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4705..5778
DNA (1074bp) protein (358aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000313|EMBL:AKH98599.1}; EC=1.2.1.38 {ECO:0000313|EMBL:AKH98599.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4ICA2_9EURY
N-acetyl-gamma-glutamyl-phosphate reductase, common form
sw_7_scaffold_584_7
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6227..6490)
DNA (264bp) protein (88aa)
Mucus-binding protein, LPXTG-motif cell wall anchor {ECO:0000313|EMBL:EIW13371.1}; TaxID=1136177 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lac
sw_7_scaffold_584_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6532..7686
DNA (1155bp) protein (385aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:EMA34737.1}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=3
Acetylornithine aminotransferase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LME9_9EURY
class III aminotransferase
sw_7_scaffold_584_9
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7683..8720
DNA (1038bp) protein (346aa)
Acetyl-lysine deacetylase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8D8_9EURY
Acetyl-lysine deacetylase {ECO:0000313|EMBL:EMA40879.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JC
acetyl-lysine deacetylase
sw_7_scaffold_584_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8717..9679
DNA (963bp) protein (321aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=1227456 species="Archaea; Euryar
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBY5_9EURY
sw_7_scaffold_584_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


9698..10942
DNA (1245bp) protein (415aa)
alaS2; alanyl-tRNA synthetase (EC:6.1.1.7)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Halobacterium sp. DL1 RepID=G4IAQ4_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:AHG04293.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_7_scaffold_584_12
unknown

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comp(11001..12035)
DNA (1035bp) protein (345aa)

This feature has no annotations

sw_7_scaffold_584_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12312..12584)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INP3_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50259.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_7_scaffold_584_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12676..13482
DNA (807bp) protein (269aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW69_HALMD
sw_7_scaffold_584_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13476..14165)
DNA (690bp) protein (230aa)
Hydrolase or acyltransferase of alpha/beta superfamily protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH44_9EURY
Hydrolase or acyltransferase of alpha/beta superfamily protein {ECO:0000313|EMBL:ELZ34831.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricu
mhpC; hydrolase
sw_7_scaffold_584_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14295..14531
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPS8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10375.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_584_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14528..16789
DNA (2262bp) protein (754aa)
ATPase AAA (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:AEH35404.1}; EC=3.6.4.3 {ECO:0000313|EMBL:AEH35404.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Ha
AAA family ATPase, CDC48 subfamily n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6X5_HALXS
sw_7_scaffold_584_18
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18049..18594
DNA (546bp) protein (182aa)
Signal-transducing histidine kinase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NTE9_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:EMA61237.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum
PAS domain S-box
sw_7_scaffold_584_19
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18586..19410)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CB29_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF99910.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_7_scaffold_584_20
Macaca mulatta, Macaca, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(19554..20489)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X4V1_SALTO
Uncharacterized protein {ECO:0000313|Ensembl:ENSMMUP00000004434}; Flags: Fragment;; TaxID=9544 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchonto
hypothetical protein
sw_7_scaffold_584_21
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20734..22695
DNA (1962bp) protein (654aa)
HTR-like protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPM6_9EURY
HTR-like protein {ECO:0000313|EMBL:EMA23126.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;
chemotaxis protein CheY rbh
sw_7_scaffold_584_22
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22702..23244)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ELL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47772.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
sw_7_scaffold_584_23
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23251..23880)
DNA (630bp) protein (210aa)
Acetyltransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0JX48_9EURY
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGB37622.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_584_24
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23956..24369
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR04_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12917.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_584_25
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24433..25560
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G5P1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ66877.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_7_scaffold_584_26

Not on your lists

25748..27040
DNA (1293bp) protein (431aa)
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y4Y1_9ARCH
rtcB_1; RtcB-like protein 1
sw_7_scaffold_584_27
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27093..27473)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DLG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35658.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_7_scaffold_584_28
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28586..29437
DNA (852bp) protein (284aa)
Initiation factor 2B related protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQX6_HALTV
initiation factor 2B related protein
Initiation factor 2B related protein {ECO:0000313|EMBL:ADB60457.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turk
sw_7_scaffold_584_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(29486..30550)
DNA (1065bp) protein (355aa)
Transcriptional regulator TrmB n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAU4_HALJB
transcriptional regulator TrmB
Transcriptional regulator TrmB {ECO:0000313|EMBL:ELY39399.1}; Transcriptional regulator, TrmB {ECO:0000313|EMBL:ADJ14816.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
Displaying items 1-30 of 41 in total

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