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sw_7_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_12_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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401..3256
DNA (2856bp) protein (952aa)
DEAD/DEAH box helicase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N613_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:EMA53372.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
DEAD/H associated domain protein
sw_7_scaffold_12_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3369..4031)
DNA (663bp) protein (221aa)
Serine esterase (EC:3.1.1.1)
Phospholipase/carboxylesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH47_9EURY
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EMA45026.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
sw_7_scaffold_12_3

Not on your lists

4231..5553
DNA (1323bp) protein (441aa)
Major Facilitator superfamily n=1 Tax=uncultured archaeon A07HB70 RepID=V4XWJ8_9ARCH
Major Facilitator superfamily {ECO:0000313|EMBL:ESS06593.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
major facilitator superfamily protein
sw_7_scaffold_12_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5784..6830
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N346_9EURY
dph2; diphthamide biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EMA51115.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
sw_7_scaffold_12_5
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7194..7517
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PCT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67957.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_7_scaffold_12_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7676..8830)
DNA (1155bp) protein (385aa)
Major facilitator superfamily protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPH5_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA47273.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
major facilitator superfamily transporter
sw_7_scaffold_12_7

Not on your lists

8882..9877
DNA (996bp) protein (332aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X6Q3_9ARCH
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ESS03334.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
NAD-dependent epimerase/dehydratase
sw_7_scaffold_12_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10045..11787
DNA (1743bp) protein (581aa)
5-oxoprolinase (EC:3.5.2.9)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=halophilic archaeon J07HX5 RepID=U1MJZ7_9EURY
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:ERG89834.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
sw_7_scaffold_12_9

Not on your lists

11784..13802
DNA (2019bp) protein (673aa)
5-oxoprolinase (EC:3.5.2.9)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SSP3_9EURY
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:ESS03336.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_7_scaffold_12_10

Not on your lists

comp(13975..14835)
DNA (861bp) protein (287aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YBS5_9ARCH
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:ESS10416.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
Thiamine pyrophosphate-binding protein
sw_7_scaffold_12_11
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15161..15529
DNA (369bp) protein (123aa)
id=24654903 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654903 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
sw_7_scaffold_12_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15646..16362)
DNA (717bp) protein (239aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ94_9EURY
ABC transporter {ECO:0000313|EMBL:EMA46640.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter-like protein
sw_7_scaffold_12_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16487..17242)
DNA (756bp) protein (252aa)
sulfate-transporting ATPase (EC:3.6.3.25)
Sulfate-transporting ATPase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVW4_9EURY
Sulfate-transporting ATPase {ECO:0000313|EMBL:ELZ27360.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallid
sw_7_scaffold_12_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17239..18282)
DNA (1044bp) protein (348aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQK4_9EURY
ABC transporter {ECO:0000313|EMBL:EMA47004.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter
sw_7_scaffold_12_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18279..19193)
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNT7_9EURY
ABC transporter {ECO:0000313|EMBL:EMA47003.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter rbh
sw_7_scaffold_12_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19197..20576)
DNA (1380bp) protein (460aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMV2_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA47002.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
extracellular ligand-binding receptor
sw_7_scaffold_12_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20859..21800)
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N973_9EURY
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:EMA53654.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alpha/beta hydrolase fold-3 domain-containing protein
sw_7_scaffold_12_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21998..23098
DNA (1101bp) protein (367aa)
NADH-dependent flavin oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M660_HALMO
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EMA40094.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
oxidoreductase
sw_7_scaffold_12_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23179..24177)
DNA (999bp) protein (333aa)
adh; alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1] id=24616548 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Alcohol dehydrogenase {ECO:0000313|EMBL:ESP87524.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
alcohol dehydrogenase
sw_7_scaffold_12_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24267..24833)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_12_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24996..25436
DNA (441bp) protein (147aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2V5_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EMA51449.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
sw_7_scaffold_12_22
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25689..26186
DNA (498bp) protein (166aa)
Putative restriction/modification enzyme (Fragment) n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPL0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA09914.1}; Flags: Fragment;; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
putative restriction/modification enzyme
sw_7_scaffold_12_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26335..27075
DNA (741bp) protein (247aa)
Putative restriction/modification enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA53191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
N-6 DNA Methylase/Eco57I restriction endonuclease
sw_7_scaffold_12_24
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27590..28096
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3V9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16117.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_7_scaffold_12_trna_1
unknown

Not on your lists

comp(28376..28460)
DNA (85bp)
transferRNA
sw_7_scaffold_12_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28521..29102)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45206.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_12_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29201..29509
DNA (309bp) protein (103aa)
Transcription initiation factor TFB 4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NE39_9EURY
tfbA_4; transcription initiation factor TFB 4
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA55828.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
sw_7_scaffold_12_27
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29641..30132)
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:ELZ36187.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELZ36187.1};; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Phosphopantetheine adenylyltransferase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPN2_9EURY
phosphopantetheine adenylyltransferase
sw_7_scaffold_12_28
unknown

Not on your lists

comp(30349..31164)
DNA (816bp) protein (272aa)

This feature has no annotations

sw_7_scaffold_12_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31334..32413)
DNA (1080bp) protein (360aa)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS {ECO:0000255
Carboxylate-amine ligase NP_3372A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CAAL_NATPD
carboxylate-amine ligase
Displaying items 1-30 of 64 in total

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