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sw_7_scaffold_126

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_126_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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684..1436
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI000299E93E
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_126_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1635..2249)
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCA1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
sw_7_scaffold_126_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2253..2681)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
sw_7_scaffold_126_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2776..3246)
DNA (471bp) protein (157aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
NusA family KH domain protein
sw_7_scaffold_126_5
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3261..4499)
DNA (1239bp) protein (413aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
sw_7_scaffold_126_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4492..7449)
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRB9_9EURY
DNA-directed RNA polymerase subunit A'
sw_7_scaffold_126_7
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7498..9324)
DNA (1827bp) protein (609aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24646171 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
sw_7_scaffold_126_8
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9430..10995)
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ELZ50928.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ50928.1};; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit B n=4 Tax=Halorubrum RepID=M0D7L7_9EURY
DNA-directed RNA polymerase subunit beta''
sw_7_scaffold_126_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10992..11222)
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit H n=1 Tax=Halobacterium sp. DL1 RepID=G4IAE4_9EURY
RNA polymerase Rpb5
sw_7_scaffold_126_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11292..11879)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91991.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
Protein of unknown function (DUF3257)
sw_7_scaffold_126_trna_1
unknown

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comp(11905..11977)
DNA (73bp)
transferRNA
sw_7_scaffold_126_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12153..12893)
DNA (741bp) protein (247aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB7_9EURY
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ELZ26821.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sou
protein-L-isoaspartate O-methyltransferase
sw_7_scaffold_126_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13082..13771)
DNA (690bp) protein (230aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pimT1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTH6_HALMO
sw_7_scaffold_126_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13844..14500)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49916.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_126_14
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14511..15983)
DNA (1473bp) protein (491aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
putative ATP-grasp enzyme
sw_7_scaffold_126_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16290..17381)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54003.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
aminopeptidase
sw_7_scaffold_126_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17503..18516
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559,
gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) (phosphorylating) (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Halococcus hamelinensis RepID=M0M6Z8_9EURY
sw_7_scaffold_126_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18664..19059
DNA (396bp) protein (132aa)
Heat shock protein Hsp20 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTS9_9EURY
Heat shock protein Hsp20 {ECO:0000313|EMBL:EFW92008.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
heat shock protein Hsp20
sw_7_scaffold_126_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19211..20134)
DNA (924bp) protein (308aa)
RimK domain protein ATP-grasp n=1 Tax=Halogranum salarium B-1 RepID=J2ZFG1_9EURY
RimK domain protein ATP-grasp {ECO:0000313|EMBL:EJN59430.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
RimK domain-containing protein ATP-grasp
sw_7_scaffold_126_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20675..21808
DNA (1134bp) protein (378aa)
Transposase (ISH16) n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M9H7_HALMO
Transposase (ISH16) {ECO:0000313|EMBL:EMA41294.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
transposase
sw_7_scaffold_126_20
unknown

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21805..21915
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 21 items

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