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sw_7_scaffold_261

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_261_1
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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1..510
DNA (510bp) protein (170aa)
Cell wall protein DAN4 n=1 Tax=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) RepID=DAN4_YEAST
Dan4p {ECO:0000313|EMBL:AJV39863.1}; TaxID=1294346 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.;" source="Sa
extracellular solute-binding protein family 5
sw_7_scaffold_261_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

726..1478
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6Q4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13931.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_261_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1953..2993
DNA (1041bp) protein (347aa)
Glycosyl transferase family 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ65_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFW93129.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
family 2 glycosyl transferase
sw_7_scaffold_261_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3023..3688)
DNA (666bp) protein (222aa)
Uracil-DNA glycosylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA3_9EURY
Uracil-DNA glycosylase {ECO:0000313|EMBL:ELZ28200.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
uracil-DNA glycosylase
sw_7_scaffold_261_5
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3797..5281)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZGP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY85231.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_7_scaffold_261_6
unknown

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5567..5719
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_261_7
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5882..9247
DNA (3366bp) protein (1122aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1495067 species="Archaea; E
Isoleucine--tRNA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5G2_9EURY
isoleucyl-tRNA synthetase
sw_7_scaffold_261_8
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9369..10241)
DNA (873bp) protein (291aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT4_HALMO
ribose-phosphate pyrophosphokinase
sw_7_scaffold_261_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10691..11527)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43856.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_261_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11704..13074
DNA (1371bp) protein (457aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AEH35846.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AEH35846.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.
Phosphoglucosamine mutase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6U9_HALXS
sw_7_scaffold_261_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13188..14252)
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXT4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90635.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_7_scaffold_261_12
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14255..14695)
DNA (441bp) protein (147aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1085029 species="Archaea; Eu
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=halophilic archaeon J07HB67 RepID=U1R3S9_9EURY
sw_7_scaffold_261_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15015..16220
DNA (1206bp) protein (402aa)
Phosphate transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3M8_9EURY
Phosphate transporter {ECO:0000313|EMBL:EMA52476.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
phosphate/sulfate permease
sw_7_scaffold_261_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16284..16715)
DNA (432bp) protein (144aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator
sw_7_scaffold_261_15
unknown

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16997..17251
DNA (255bp) protein (85aa)

This feature has no annotations

sw_7_scaffold_261_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17309..17995
DNA (687bp) protein (229aa)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRF8_NATM8
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) {ECO:0000313|EMBL:CCQ36794.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
sw_7_scaffold_261_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17995..18285
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38166.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
ABC-type transport system small membrane protein (probable substrate cobalt/nickel/biotin)
sw_7_scaffold_261_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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18299..19099
DNA (801bp) protein (267aa)
cbiQ; ABC-type cobalt transport system, permease II; K02008 cobalt/nickel transport system permease protein id=24629216 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ERG91966.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
cbiQ2; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
sw_7_scaffold_261_19
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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19096..19941
DNA (846bp) protein (282aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=Halonotius sp. J07HN4 RepID=U1QGY2_9EURY
cbiO; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:ERH06103.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
sw_7_scaffold_261_20
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20060..20338)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D5H0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30741.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_7_scaffold_261_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20438..21619)
DNA (1182bp) protein (394aa)
Nucleotidyl transferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8N9_9EURY
Nucleotidyl transferase {ECO:0000313|EMBL:EMA53943.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
glucose-1-phosphate thymidylyltransferase
sw_7_scaffold_261_22
CSP1_5_NC10, NC10, Bacteria

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comp(21772..22107)
DNA (336bp) protein (112aa)
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=14430160 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase Tax=CSP1_5_NC10
dioxygenase, ferredoxin subunit
sw_7_scaffold_261_23
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22753..23295
DNA (543bp) protein (181aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA16654.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_7_scaffold_261_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23292..24341
DNA (1050bp) protein (350aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
sw_7_scaffold_261_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24521..25786
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_7_scaffold_261_26
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25787..26095
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=4 Tax=Haloquadratum walsbyi RepID=RS10_HALWD
rps10p; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" s
sw_7_scaffold_261_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26585..27256
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_261_trna_1
unknown

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27359..27430
DNA (72bp)
transferRNA
sw_7_scaffold_261_28
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(27610..29217)
DNA (1608bp) protein (536aa)
Type I restriction-modification system methyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKV9_9EURY
type I restriction-modification system methyltransferase
Type I restriction-modification system methyltransferase {ECO:0000313|EMBL:CCQ34096.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_7_scaffold_261_29
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(29221..29529)
DNA (309bp) protein (103aa)
Putative N6-adenine-specific DNA methylase (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1R4D1_9EURY
Modification methylase PaeR7I {ECO:0000313|EMBL:CQR49833.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
type I restriction-modification system methyltransferase
Displaying 30 items

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