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sw_7_scaffold_262

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_262_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1032)
DNA (1032bp) protein (344aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Fragment) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDZ8_9EURY
Phytoene dehydrogenase {ECO:0000313|EMBL:EMA43971.1}; Flags: Fragment;; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_7_scaffold_262_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1298..2812
DNA (1515bp) protein (505aa)
MATE efflux family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3C0_9EURY
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ADB60821.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
sw_7_scaffold_262_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2962..4464
DNA (1503bp) protein (501aa)
lignostilbene-alpha,beta-dioxygenase (EC:1.13.11.-)
Lignostilbene-alpha,beta-dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K7_9EURY
Lignostilbene-alpha,beta-dioxygenase {ECO:0000313|EMBL:EMA51965.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
sw_7_scaffold_262_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4648..4983
DNA (336bp) protein (112aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA49338.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
putative pyrophosphatase
sw_7_scaffold_262_5

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comp(5075..5758)
DNA (684bp) protein (228aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XVF9_9ARCH
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:ESS06168.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
thiamine pyrophosphate protein domain protein TPP-binding protein
sw_7_scaffold_262_6

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comp(5748..6257)
DNA (510bp) protein (170aa)
comDE; sulfopyruvate decarboxylase (EC:4.1.1.79)
Putative thiamine-pyrophosphate-binding protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDX3_9ARCH
Putative thiamine-pyrophosphate-binding protein {ECO:0000313|EMBL:ESS06169.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_7_scaffold_262_7
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6345..7787)
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLM5_9EURY
amidase
Amidase {ECO:0000313|EMBL:AHG01990.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_7_scaffold_262_8

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comp(7949..8482)
DNA (534bp) protein (178aa)
UspA domain-containing protein n=1 Tax=halophilic archaeon DL31 RepID=G2MG46_9ARCH
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEN05940.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_262_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8615..9115
DNA (501bp) protein (167aa)
UspA domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWF2_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA50047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
UspA domain-containing protein
sw_7_scaffold_262_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9821..11296
DNA (1476bp) protein (492aa)
mmsA; methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] id=24615488 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ESP87032.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mmsA; methylmalonate-semialdehyde dehydrogenase
sw_7_scaffold_262_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11490..12899
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP00_9EURY
livH; ABC-type branched-chain amino acid transport system, permease I
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAJ52915.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_7_scaffold_262_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12907..14691
DNA (1785bp) protein (595aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LJM9_HALWC
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC40963.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
sw_7_scaffold_262_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14688..15659
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW79_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92734.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_7_scaffold_262_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15968..17446
DNA (1479bp) protein (493aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PRP9_9EURY
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG95021.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
livJ3; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_7_scaffold_262_15
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17630..18340
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_7_scaffold_262_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18504..19667
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycine/D-amino acid oxidase, deaminating
sw_7_scaffold_262_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19774..20397)
DNA (624bp) protein (208aa)
GCN5-related N-acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IB93_9EURY
Protein N-acetyltransferase {ECO:0000313|EMBL:AHG02657.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1
protein N-acetyltransferase
sw_7_scaffold_262_18
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20394..20750)
DNA (357bp) protein (119aa)
UspA domain-containing protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JHV8_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA08561.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans AT
uspA; stress response protein-like protein
sw_7_scaffold_262_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20784..21638
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD19_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43248.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_262_20
unknown

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21757..21909
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_262_21
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21902..23725
DNA (1824bp) protein (608aa)
Beta-lactamase n=4 Tax=Bacillus thuringiensis RepID=C3DBE0_BACTU
Beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:EEM62889.1}; TaxID=527031 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar be
sw_7_scaffold_262_22
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24658..25194
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L4F3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA28457.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
sw_7_scaffold_262_23
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25360..25845)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PN66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70250.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_7_scaffold_262_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25960..26310)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NW72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA61489.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_7_scaffold_262_25
unknown

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26929..27330
DNA (402bp) protein (134aa)

This feature has no annotations

sw_7_scaffold_262_26
unknown

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comp(27510..27632)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_7_scaffold_262_27
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28110..30707
DNA (2598bp) protein (866aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H3J6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ79081.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_7_scaffold_262_28
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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31177..31512
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB25509.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
sw_7_scaffold_262_29
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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31534..31827
DNA (294bp) protein (98aa)
Transposase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT46_9EURY
Transposase {ECO:0000313|EMBL:EFW92327.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
transposase
Displaying 29 items

View Taxonomy