ggKbase home page

sw_7_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 53 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_68_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..399)
DNA (399bp) protein (133aa)
ADP-ribose pyrophosphatase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YEI5_9EURY
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:GAD52221.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
NUDIX hydrolase
sw_7_scaffold_68_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

536..1276
DNA (741bp) protein (247aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGD3_HALAR
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMA19224.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
glycerophosphodiester phosphodiesterase
sw_7_scaffold_68_3

Not on your lists

comp(1348..1860)
DNA (513bp) protein (171aa)
Cupin domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6F3_9ARCH
Cupin domain protein {ECO:0000313|EMBL:ESS10438.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_7_scaffold_68_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1960..3225)
DNA (1266bp) protein (422aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXU7_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ28041.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
amidohydrolase
sw_7_scaffold_68_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3268..4155
DNA (888bp) protein (296aa)
Aldo/keto reductase family oxidoreductase n=2 Tax=Haloarcula hispanica RepID=G0HYD7_HALHT
mocA; aldo/keto reductase family oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHB66869.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_7_scaffold_68_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4180..4464)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51682.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_7_scaffold_68_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4472..4951)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNL6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46958.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_68_8
unknown

Not on your lists

5201..5488
DNA (288bp) protein (96aa)

This feature has no annotations

sw_7_scaffold_68_9
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5536..6657)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IFG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR50362.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_7_scaffold_68_10
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7047..7622
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YUX7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY77929.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_7_scaffold_68_11
unknown

Not on your lists

comp(7596..7775)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_7_scaffold_68_trna_1
unknown

Not on your lists

comp(7887..7959)
DNA (73bp)
transferRNA
sw_7_scaffold_68_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8084..8443)
DNA (360bp) protein (120aa)
Zinc finger CHY domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQE0_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA46959.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
sw_7_scaffold_68_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8443..9054)
DNA (612bp) protein (204aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=2 Tax=Haloarcula RepID=TRMY_HALMA
hypothetical protein
sw_7_scaffold_68_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9137..10114)
DNA (978bp) protein (326aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS8_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA36181.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
galE7; UDP-glucose 4-epimerase
sw_7_scaffold_68_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10140..11120)
DNA (981bp) protein (327aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA1_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA55513.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
galE5; UDP-glucose 4-epimerase
sw_7_scaffold_68_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11155..12318)
DNA (1164bp) protein (388aa)
UDP-sulfoquinovose synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR82_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:EMA46965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
sqdB; UDP-sulfoquinovose synthase
sw_7_scaffold_68_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12541..14358)
DNA (1818bp) protein (606aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2W6_9EURY
glucosamine/fructose-6-phosphate aminotransferase
sw_7_scaffold_68_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14358..15551)
DNA (1194bp) protein (398aa)
Nucleotidyl transferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MS82_HALMO
Nucleotidyl transferase {ECO:0000313|EMBL:EMA48471.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
nucleotidyl transferase
sw_7_scaffold_68_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15891..16520)
DNA (630bp) protein (210aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIJ7_9EURY
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:EMA45512.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
heat shock protein DnaJ domain-containing protein
sw_7_scaffold_68_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16715..17239
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XGC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59733.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_7_scaffold_68_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17236..17607
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43327.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_68_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18053..19408
DNA (1356bp) protein (452aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWK5_HALBP
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ADQ69425.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source
sw_7_scaffold_68_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19519..21321)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N228_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51926.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_7_scaffold_68_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21347..21928)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM31_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45794.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_68_25
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22075..22890)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CQ55_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ24768.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_7_scaffold_68_26
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23067..25217)
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16498.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_7_scaffold_68_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25406..26653
DNA (1248bp) protein (416aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DLE6_9EURY
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:ELZ34974.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
sw_7_scaffold_68_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26720..27613
DNA (894bp) protein (298aa)
Bifunctional protein FolD n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N493_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
Methenyltetrahydrofolate cyclohydrolase
sw_7_scaffold_68_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27610..28131
DNA (522bp) protein (174aa)
ADP-ribose pyrophosphatase, GDP-mannose mannosyl hydrolase (EC:3.6.1.13 3.6.1.-)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX7_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA50853.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Displaying items 1-30 of 53 in total

View Taxonomy