ggKbase home page

sw_7_scaffold_87

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_87_1
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(347..2362)
DNA (2016bp) protein (672aa)
N-6 DNA Methylase/Eco57I restriction endonuclease n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AE39_NATGS
N-6 DNA Methylase/Eco57I restriction endonuclease
N-6 DNA Methylase/Eco57I restriction endonuclease {ECO:0000313|EMBL:AFZ71417.1}; Putative restriction/modification enzyme {ECO:0000313|EMBL:ELY66943.1}; TaxID=797304 species="Archaea; Euryarchaeota; H
sw_7_scaffold_87_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2566..4530
DNA (1965bp) protein (655aa)
ATP-dependent RNA helicase protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DIB2_9EURY
ATP-dependent RNA helicase protein {ECO:0000313|EMBL:ERJ05687.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
SNF2 family helicase
sw_7_scaffold_87_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4527..7367
DNA (2841bp) protein (947aa)
Restriction endonuclease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CW05_9EURY
hypothetical protein
Restriction endonuclease protein {ECO:0000313|EMBL:ERJ05686.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34902.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_7_scaffold_87_4
unknown

Not on your lists

7367..8308
DNA (942bp) protein (314aa)

This feature has no annotations

sw_7_scaffold_87_5
unknown

Not on your lists

8491..8646
DNA (156bp) protein (52aa)

This feature has no annotations

sw_7_scaffold_87_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8875..9504
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49333.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_87_7
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9599..10351)
DNA (753bp) protein (251aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWT0_NATMM
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY90323.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirens
sw_7_scaffold_87_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10480..11091)
DNA (612bp) protein (204aa)
Translation initiation factor IF-2 subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7B9_9EURY
Translation initiation factor IF-2 subunit beta {ECO:0000313|EMBL:EMA53842.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor IF2/IF5
sw_7_scaffold_87_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11194..11526
DNA (333bp) protein (111aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|H
Dihydroneopterin aldolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTW6_9EURY
hypothetical protein
sw_7_scaffold_87_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12080..12427)
DNA (348bp) protein (116aa)
Ferredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHE4_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA44768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
fdx; ferredoxin
sw_7_scaffold_87_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12505..13908)
DNA (1404bp) protein (468aa)
Selenium-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S0_9EURY
Selenium-binding protein {ECO:0000313|EMBL:EMA53277.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
56kDa selenium binding protein (SBP56)
sw_7_scaffold_87_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14298..14768
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W766_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00783.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_7_scaffold_87_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15031..15768)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49817.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
PAC2 family protein
sw_7_scaffold_87_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16000..16908
DNA (909bp) protein (303aa)
RNA methylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD55_9EURY
RNA methylase {ECO:0000313|EMBL:EMA43283.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
NOL1/NOP2/sun family putative RNA methylase
sw_7_scaffold_87_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16905..17471
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49815.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_87_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17602..19185)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49811.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_87_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19304..19753
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28137.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_7_scaffold_87_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19804..21237)
DNA (1434bp) protein (478aa)
Type III restriction protein res subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M702_9EURY
Type III restriction protein res subunit {ECO:0000313|EMBL:EMA41582.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
helicase
sw_7_scaffold_87_19
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21393..22232
DNA (840bp) protein (280aa)
Protein GrpE n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X8F7_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimn
molecular chaperone GrpE (heat shock protein)
sw_7_scaffold_87_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22311..22610
DNA (300bp) protein (100aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
sw_7_scaffold_87_21
unknown

Not on your lists

22671..23372
DNA (702bp) protein (234aa)

This feature has no annotations

sw_7_scaffold_87_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23494..24198)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ78_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
Displaying 22 items

View Taxonomy