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sw_7_scaffold_1142

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1142_1

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261..995
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XJ77_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS08324.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_7_scaffold_1142_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(835..1269)
DNA (435bp) protein (145aa)
acyl-CoA thioester hydrolase (EC:3.1.2.-)
Acyl-CoA hydrolase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NH95_9EURY
Acyl-CoA hydrolase {ECO:0000313|EMBL:ERG96248.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
sw_7_scaffold_1142_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1532..3235
DNA (1704bp) protein (568aa)
AMP-dependent synthetase and ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CBT1_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ20746.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limi
AMP-dependent synthetase and ligase
sw_7_scaffold_1142_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3362..3778)
DNA (417bp) protein (139aa)
GCN5-related N-acetyltransferase id=24644190 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Sortase related acyltransferase {ECO:0000313|EMBL:ERH08423.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
zinc finger CHY domain protein
sw_7_scaffold_1142_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3893..4756)
DNA (864bp) protein (288aa)
Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit n=2 Tax=Haloarcula hispanica RepID=G0HQI5_HALHT
2-oxoacid ferredoxin oxidoreductase
2-oxoacid ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AHB65771.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
sw_7_scaffold_1142_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4753..6513)
DNA (1761bp) protein (587aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein n=2 Tax=Halobacteriaceae RepID=M0CQD9_9EURY
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ25456.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
sw_7_scaffold_1142_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6727..7530)
DNA (804bp) protein (268aa)
Type 11 methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JEK5_HALVA
Type 11 methyltransferase {ECO:0000313|EMBL:EMA15927.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATC
S-adenosylmethionine-dependent methyltransferase
sw_7_scaffold_1142_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7759..8034
DNA (276bp) protein (92aa)
NP1176A family transcription regulator n=2 Tax=Haloquadratum walsbyi RepID=G0LGF3_HALWC
NP1176A family transcription regulator
NP_1176A family transcription regulator {ECO:0000313|EMBL:CCC39173.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
sw_7_scaffold_1142_9
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8062..8859
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6G6_9EURY
metallo-beta-lactamase
Metallo-beta-lactamase {ECO:0000313|EMBL:AJF24978.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_1142_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8950..10233
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKT6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33693.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_1142_11
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10437..11267)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JH65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR48783.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_7_scaffold_1142_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11597..12430
DNA (834bp) protein (278aa)
glpQ1; glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:AHZ24483.1}; Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AFK21449.1}; EC=3.1.4.46 {ECO:0000313|EMBL:AFK21449.1};; TaxID=5238
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RB39_HALMT
sw_7_scaffold_1142_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12439..12618)
DNA (180bp) protein (60aa)
Uncharacterized protein n=7 Tax=Haloarcula RepID=G0HUQ2_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA26581.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_7_scaffold_1142_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12910..14031
DNA (1122bp) protein (374aa)
Aminotransferase class I and II n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P152_HALMD
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACV49067.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_7_scaffold_1142_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14354..14965)
DNA (612bp) protein (204aa)
Translation initiation factor IF-2 subunit beta n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGQ0_9EURY
Translation initiation factor IF-2 subunit beta {ECO:0000313|EMBL:ELZ33344.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
translation initiation factor 2 subunit beta (aeif-2b)
sw_7_scaffold_1142_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15185..16270)
DNA (1086bp) protein (362aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=halophilic archaeon J07HX64 PF01_9EURY">RepID=U1PF01_9EURY
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:ERH08926.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
peptidase M29 aminopeptidase II
sw_7_scaffold_1142_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16441..16599)
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH10363.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_7_scaffold_1142_18
unknown

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16717..16878
DNA (162bp) protein (54aa)

This feature has no annotations

sw_7_scaffold_1142_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17127..18803
DNA (1677bp) protein (559aa)
cctB; thermosome subunit beta id=24645186 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Thermosome subunit {ECO:0000313|EMBL:ERH09405.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cctB; thermosome subunit beta
sw_7_scaffold_1142_20
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18947..19357)
DNA (411bp) protein (137aa)
UspA domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LYK9_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:EMA37434.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
universal stress protein UspA-like protein
sw_7_scaffold_1142_21

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comp(19431..20408)
DNA (978bp) protein (326aa)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=1412871 species="Archaea; environmental sa
ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZPI3_9ARCH
sw_7_scaffold_1142_22
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(20984..21532)
DNA (549bp) protein (183aa)
NUDIX hydrolase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMY2_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ85945.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
ADP-ribose pyrophosphatase
sw_7_scaffold_1142_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21529..22563)
DNA (1035bp) protein (345aa)
Threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=24648190 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
L-threonine aldolase {ECO:0000313|EMBL:ERH09324.1}; EC=4.1.2.5 {ECO:0000313|EMBL:ERH09324.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archae
Threonine aldolase
sw_7_scaffold_1142_24
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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22771..23784
DNA (1014bp) protein (338aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEZ0_NATGS
F420-dependent methylene-tetrahydromethanopterin reductase
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:AFZ72483.1}; Luciferase-like protein {ECO:0000313|EMBL:ELY74355.1}; TaxID=797304 species="
Displaying 24 items

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