ggKbase home page

sw_7_scaffold_1492

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1492_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(177..1874)
DNA (1698bp) protein (566aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRX9_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA47215.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
AMP-dependent synthetase and ligase
sw_7_scaffold_1492_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2235..3545)
DNA (1311bp) protein (437aa)
ribonuclease R n=1 Tax=Halomicrobium katesii RepID=UPI00037C1F60
ribonuclease II
Ribonuclease II {ECO:0000313|EMBL:ACV46409.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain
sw_7_scaffold_1492_3
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3805..4050)
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY32887.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_7_scaffold_1492_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4542..6254)
DNA (1713bp) protein (571aa)
Pre-mRNA splicing helicase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LS85_HALJP
Pre-mRNA splicing helicase {ECO:0000313|EMBL:EMA34930.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
brr2; Pre-mRNA splicing helicase
sw_7_scaffold_1492_5
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7427..7663
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LI66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA33317.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_7_scaffold_1492_6
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8005..8484)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BSA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12544.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_7_scaffold_1492_7
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8691..8924)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IBB4_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15536.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_7_scaffold_1492_8
unknown

Not on your lists

9052..9498
DNA (447bp) protein (149aa)

This feature has no annotations

sw_7_scaffold_1492_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10083..11012
DNA (930bp) protein (310aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4R8_9EURY
lipoate synthase
sw_7_scaffold_1492_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11256..12215)
DNA (960bp) protein (320aa)
GMP synthase (Glutamine-hydrolyzing), subunit A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X942_9EURY
GMP synthase (Glutamine-hydrolyzing), subunit A {ECO:0000313|EMBL:ELY58112.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natron
GMP synthase family protein
sw_7_scaffold_1492_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12243..13370
DNA (1128bp) protein (376aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYM6_9EURY
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:ERH11087.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
pyruvate dehydrogenase E1 component, alpha subunit
sw_7_scaffold_1492_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13373..14371
DNA (999bp) protein (333aa)
Transketolase central region n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N015_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA49990.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
sw_7_scaffold_1492_13

Not on your lists

15014..15709
DNA (696bp) protein (232aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0S8_9ARCH
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:ESS04527.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="unculture
branched-chain alpha-keto acid dehydrogenase subunit E2
sw_7_scaffold_1492_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15709..17124
DNA (1416bp) protein (472aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4Q9_9EURY
dihydrolipoamide dehydrogenase
sw_7_scaffold_1492_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17471..17923
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UQP0_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY27250.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_7_scaffold_1492_16
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17929..19617)
DNA (1689bp) protein (563aa)
Ammonium transporter n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XS69_9EURY
Ammonium transporter {ECO:0000313|EMBL:ELY64639.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.
ammonia permease
sw_7_scaffold_1492_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20115..21476)
DNA (1362bp) protein (454aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1B2_HALMD
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit {ECO:0000313|EMBL:ACV47120.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobi
sw_7_scaffold_1492_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21580..22227)
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2Q9_9EURY
hisH; imidazole glycerol phosphate synthase subunit HisH
sw_7_scaffold_1492_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22297..23112)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDC5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59740.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
ABC-type antimicrobial peptide transport system, permease component
sw_7_scaffold_1492_20
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23456..24208)
DNA (753bp) protein (251aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VV55_9EURY
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGN00151.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum
sw_7_scaffold_1492_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24639..25967
DNA (1329bp) protein (443aa)
Neutral proteinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHD8_9EURY
transposase (IS891/IS1136/IS1341/IS605)
Neutral proteinase {ECO:0000313|EMBL:ERJ04763.1}; Transposase (IS891/IS1136/IS1341/IS605) {ECO:0000313|EMBL:CCQ34956.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_7_scaffold_1492_trna_1
unknown

Not on your lists

26013..26087
DNA (75bp)
transferRNA
sw_7_scaffold_1492_22
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26459..26794
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJ80_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ96082.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_7_scaffold_1492_23
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26845..27129
DNA (285bp) protein (95aa)
CopG family transcriptional regulator n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AA73_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:ELY95655.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeire
CopG family transcriptional regulator
sw_7_scaffold_1492_24
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27141..27404
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Natrialba RepID=M0AFC3_NATA1
RelE family protein {ECO:0000313|EMBL:AKH96970.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfur
cytotoxic translational repressor of toxin-antitoxin stability system
sw_7_scaffold_1492_25
unknown

Not on your lists

comp(27424..27912)
DNA (489bp) protein (163aa)

This feature has no annotations

sw_7_scaffold_1492_26
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28234..28557
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A312_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59698.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
tnp; phage integrase/site-specific recombinase
sw_7_scaffold_1492_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28680..29144
DNA (465bp) protein (155aa)
UspA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMJ8_NATPD
stress response protein
UspA domain protein {ECO:0000313|EMBL:CAI50660.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_7_scaffold_1492_28
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29217..29468
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BHD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ00483.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
sw_7_scaffold_1492_29
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29507..32002)
DNA (2496bp) protein (832aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AEH35412.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEH35412.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbacea
Heavy metal translocating P-type ATPase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6Y3_HALXS
Displaying items 1-30 of 33 in total

View Taxonomy