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sw_7_scaffold_1500

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1500_trna_1
unknown

Not on your lists

comp(1..72)
DNA (72bp)
transferRNA
sw_7_scaffold_1500_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(210..518)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ72_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
rps10p; 30S ribosomal protein S10
sw_7_scaffold_1500_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(520..1788)
DNA (1269bp) protein (423aa)
tef1a; elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIE8_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_7_scaffold_1500_3
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2026..4359)
DNA (2334bp) protein (778aa)
PAS sensor protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZRQ9_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELY89014.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
PAS sensor protein
sw_7_scaffold_1500_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4440..5390)
DNA (951bp) protein (317aa)
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGK3_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:ELZ22415.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
sw_7_scaffold_1500_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5387..5920)
DNA (534bp) protein (178aa)
Amino acid-binding ACT protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM2_9EURY
Amino acid-binding ACT protein {ECO:0000313|EMBL:ELZ22416.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
amino acid-binding protein
sw_7_scaffold_1500_6
unknown

Not on your lists

6215..6451
DNA (237bp) protein (79aa)

This feature has no annotations

sw_7_scaffold_1500_7
unknown

Not on your lists

comp(6432..6539)
DNA (108bp) protein (36aa)

This feature has no annotations

sw_7_scaffold_1500_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6584..7060)
DNA (477bp) protein (159aa)
AsnC family transcriptional regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWY3_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ14918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
AsnC family transcriptional regulator
sw_7_scaffold_1500_9
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7321..7578
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BIE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09414.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_7_scaffold_1500_10
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7653..8057
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CPA8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF98979.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_7_scaffold_1500_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8066..9031)
DNA (966bp) protein (322aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J7K8_HALJB
inosine-uridine preferring nucleoside hydrolase
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:ADJ16028.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source=
sw_7_scaffold_1500_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9965..11197)
DNA (1233bp) protein (411aa)
hypothetical protein id=24633277 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uncharacterized protein {ECO:0000313|EMBL:ERG96065.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_7_scaffold_1500_13
unknown

Not on your lists

11229..11414
DNA (186bp) protein (62aa)

This feature has no annotations

sw_7_scaffold_1500_14
unknown

Not on your lists

11853..11963
DNA (111bp) protein (37aa)

This feature has no annotations

sw_7_scaffold_1500_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11960..12427
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20599.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_1500_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12487..13758
DNA (1272bp) protein (424aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNN1_9EURY
histidinol dehydrogenase
sw_7_scaffold_1500_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13793..14512
DNA (720bp) protein (240aa)
radB; DNA repair and recombination protein RadB id=24647500 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
radB; DNA repair and recombination protein RadB
Displaying 18 items

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