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sw_7_scaffold_1588

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1588_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..576)
DNA (576bp) protein (192aa)
lplA; lipoate-protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=24646881 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Lipoate-protein ligase A {ECO:0000313|EMBL:ERH11044.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
biotin/lipoate A/B protein ligase
sw_7_scaffold_1588_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

672..1646
DNA (975bp) protein (325aa)
Luciferase-like protein n=1 Tax=Halogranum salarium B-1 RepID=J3EVB1_9EURY
Luciferase-like protein {ECO:0000313|EMBL:EJN58532.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
luciferase-like protein
sw_7_scaffold_1588_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1733..3502
DNA (1770bp) protein (590aa)
Peptidase S8/S53 subtilisin kexin sedolisin n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W506_9EURY
Peptidase S8/S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AGN01442.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarcha
peptidase S8/S53 subtilisin kexin sedolisin
sw_7_scaffold_1588_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3592..5595
DNA (2004bp) protein (668aa)
UvrABC system protein B n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KNA8_HALAR
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; excinuclease ABC subunit B
sw_7_scaffold_1588_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5630..6310)
DNA (681bp) protein (227aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W9S3_9EURY
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ELY46245.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ban
HAD-superfamily hydrolase, subfamily IA, variant 1
sw_7_scaffold_1588_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6312..6791)
DNA (480bp) protein (160aa)
hypothetical protein id=24644586 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08806.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_1588_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6861..7097)
DNA (237bp) protein (79aa)
hypothetical protein id=24644585 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08805.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_1588_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7097..7483)
DNA (387bp) protein (129aa)
Prefoldin subunit beta n=8 Tax=Haloarcula RepID=PFDB_HALMA
pfdB; prefoldin beta subunit
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
sw_7_scaffold_1588_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7529..7786)
DNA (258bp) protein (86aa)
hypothetical protein id=24647674 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08808.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_1588_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7786..7920)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=1 Tax=Halobacterium sp. DL1 RepID=G4II73_9EURY
DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)
sw_7_scaffold_1588_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7917..8192)
DNA (276bp) protein (92aa)
50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae id=24644590 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
ribosomal protein L37AE/L43A
sw_7_scaffold_1588_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8782..9504)
DNA (723bp) protein (241aa)
hypothetical protein id=24647677 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative metal-binding protein {ECO:0000313|EMBL:ERH08811.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_1588_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9662..10810)
DNA (1149bp) protein (383aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=24644592 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D
sw_7_scaffold_1588_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10930..11625)
DNA (696bp) protein (232aa)
proteasome endopeptidase complex protein (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
proteasome subunit beta n=1 Tax=Halomicrobium katesii RepID=UPI0003669C8E
sw_7_scaffold_1588_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11618..12358)
DNA (741bp) protein (247aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
sw_7_scaffold_1588_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12501..12839)
DNA (339bp) protein (113aa)
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29) id=24645975 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ERH10194.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ERH10194.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
peptidyl-tRNA hydrolase (EC:3.1.1.29)
sw_7_scaffold_1588_17

Not on your lists

comp(13184..13432)
DNA (249bp) protein (83aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=1 Tax=uncultured archaeon A07HN63 RepID=V4YDY2_9ARCH
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ESS09357.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_7_scaffold_1588_18
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13439..13759)
DNA (321bp) protein (107aa)
hypothetical protein id=24620711 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Ribonuclease R winged-helix domain protein {ECO:0000313|EMBL:ERH02629.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius s
hypothetical protein
sw_7_scaffold_1588_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14796..16046
DNA (1251bp) protein (417aa)
ATPase-like protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6CVQ5_9EURY
ATPase-like protein
ATPase-like protein {ECO:0000313|EMBL:CCQ34632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
Displaying 19 items

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