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sw_7_scaffold_1883

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1883_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..394
DNA (393bp) protein (131aa)
50S ribosomal protein L13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT4_9EURY
rpl13p; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_7_scaffold_1883_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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388..789
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ12_HALMD
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_7_scaffold_1883_3
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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794..994
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) id=24648746 bin=uncultivated_archaeon_J07ABHX6 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
sw_7_scaffold_1883_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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997..1176
DNA (180bp) protein (60aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=24655919 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
RNA polymerase Rpb6
sw_7_scaffold_1883_5
unknown

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comp(1383..1703)
DNA (321bp) protein (107aa)

This feature has no annotations

sw_7_scaffold_1883_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1823..2293
DNA (471bp) protein (157aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase {ECO:0000255|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000255|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000255|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
Enolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSE0_9EURY
sw_7_scaffold_1883_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2290..3099
DNA (810bp) protein (270aa)
30S ribosomal protein S2 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KLV7_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
30S ribosomal protein S2
sw_7_scaffold_1883_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3224..3604
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ17_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48706.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_1883_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3597..4766)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1D9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02411.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_7_scaffold_1883_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4941..6068)
DNA (1128bp) protein (376aa)
peptidase S1 and S6 chymotrypsin/Hap id=24650012 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Serine proteinase {ECO:0000313|EMBL:ERH11091.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
htrA1; serine protease HtrA
sw_7_scaffold_1883_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6385..7320
DNA (936bp) protein (312aa)
menB; naphthoate synthase (EC:4.1.3.36); K01661 naphthoate synthase [EC:4.1.3.36] id=24647150 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1085028 spec
menB; naphthoate synthase (EC:4.1.3.36)
sw_7_scaffold_1883_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7286..8056)
DNA (771bp) protein (257aa)
Putative divalent heavy-metal cations transporter n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIL7_NATP1
putative divalent heavy-metal cations transporter
Zinc/iron permease {ECO:0000313|EMBL:ELZ10262.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DSM 11
sw_7_scaffold_1883_13
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8308..9222
DNA (915bp) protein (305aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
14-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V3S5_HALMA
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
sw_7_scaffold_1883_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9219..10250
DNA (1032bp) protein (344aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
ykfB3; chloromuconate cycloisomerase id=24648263 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
ykfB1; chloromuconate cycloisomerase
sw_7_scaffold_1883_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10254..11840
DNA (1587bp) protein (529aa)
O-succinylbenzoate-CoA ligase (EC:6.2.1.26)
acyl-CoA synthetase id=24648262 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:ERH09397.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX6
sw_7_scaffold_1883_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11851..12603)
DNA (753bp) protein (251aa)
tfbB; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB id=24654732 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s
tfbB; transcription initiation factor IIB
Displaying 16 items

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