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sw_7_scaffold_227

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_227_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

230..1600
DNA (1371bp) protein (457aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR25_9EURY
sw_7_scaffold_227_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1653..2441
DNA (789bp) protein (263aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_7_scaffold_227_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2438..2854
DNA (417bp) protein (139aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_7_scaffold_227_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2855..3163)
DNA (309bp) protein (103aa)
transcription factor TFIIB id=24648941 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
tfbA_4; transcription initiation factor TFB 4
Cyclin domain protein {ECO:0000313|EMBL:CAI49950.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_7_scaffold_227_trna_1
unknown

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3245..3329
DNA (85bp)
transferRNA
sw_7_scaffold_227_5
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3936..5465
DNA (1530bp) protein (510aa)
FAD dependent oxidoreductase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZIU4_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELY86425.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890
FAD dependent oxidoreductase rbh
sw_7_scaffold_227_6

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comp(5495..6748)
DNA (1254bp) protein (418aa)
Sugar phosphate permease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y588_9ARCH
Sugar phosphate permease {ECO:0000313|EMBL:ESS07871.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
major facilitator superfamily transporter
sw_7_scaffold_227_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7152..8150
DNA (999bp) protein (333aa)
Dihydroxyacetone kinase subunit DhaK n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W610_9EURY
dihydroxyacetone kinase subunit DhaK
Dihydroxyacetone kinase subunit DhaK {ECO:0000313|EMBL:AGN02047.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
sw_7_scaffold_227_8
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8229..8936
DNA (708bp) protein (236aa)
DhaL protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHR9_9EURY
dihydroxyacetone kinase
Dihydroxyacetone kinase {ECO:0000313|EMBL:AHG01551.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_7_scaffold_227_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8936..9325
DNA (390bp) protein (130aa)
Dihydroxyacetone kinase phosphotransfer subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9Z2_9EURY
dihydroxyacetone kinase phosphotransfer subunit
Dihydroxyacetone kinase phosphotransfer subunit {ECO:0000313|EMBL:AGN02049.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salina
sw_7_scaffold_227_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9361..9558)
DNA (198bp) protein (66aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:EMA64284.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
sw_7_scaffold_227_11
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9545..9829)
DNA (285bp) protein (95aa)
Phosphotransferase System HPr (HPr) family n=2 Tax=Archaea RepID=U1NZY6_9EURY
Phosphotransferase System HPr (HPr) family {ECO:0000313|EMBL:ERH03144.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius s
hpr; sugar phosphotransferase system (PTS) protein Hpr
sw_7_scaffold_227_12
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9979..10452
DNA (474bp) protein (158aa)
Halocyanin n=1 Tax=Haloferax sp. BAB2207 RepID=L5NY68_9EURY
Halocyanin {ECO:0000313|EMBL:ELK55350.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hcpD; halocyanin
sw_7_scaffold_227_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10514..12913
DNA (2400bp) protein (800aa)
multi-sensor signal transduction histidine kinase id=24621166 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:ERH01588.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source=
putative light and redox sensing histidine kinase
sw_7_scaffold_227_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13187..13810)
DNA (624bp) protein (208aa)
30S ribosomal protein S3Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK83_9EURY
30S ribosomal protein S3Ae {ECO:0000256|HAMAP-Rule:MF_00359, ECO:0000256|SAAS:SAAS00194211}; Ribosomal protein S1e {ECO:0000256|HAMAP-Rule:MF_00359}; TaxID=797114 species="Archaea; Euryarchaeota; Halo
30S ribosomal protein S3Ae
sw_7_scaffold_227_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13807..14070)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWN5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48245.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_227_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14067..15248)
DNA (1182bp) protein (394aa)
RecJ-like exonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHK4_9EURY
RecJ-like exonuclease {ECO:0000313|EMBL:ELZ22780.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
recJ2; exonuclease RecJ
sw_7_scaffold_227_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15250..15801)
DNA (552bp) protein (184aa)
rps15p; 30S ribosomal protein S15P; K02956 small subunit ribosomal protein S15 id=24646723 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SSU ribosomal protein S15P {ECO:0000313|EMBL:ERH10890.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps15p; 30S ribosomal protein S15
sw_7_scaffold_227_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16017..16742
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1R6_9EURY
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
sw_7_scaffold_227_19
unknown

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comp(16746..16982)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 20 items

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