ggKbase home page

sw_7_scaffold_248

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_248_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..844)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P8M7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88486.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_7_scaffold_248_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1332..1454)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7G7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27905.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_7_scaffold_248_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1970..2128
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59224.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
small CPxCG-related zinc finger protein
sw_7_scaffold_248_4
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2130..2507
DNA (378bp) protein (126aa)
HTR-like protein {ECO:0000313|EMBL:CDK38493.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK38493.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
HTR-like protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTG2_9EURY
response regulator receiver protein
sw_7_scaffold_248_5
unknown

Not on your lists

2576..2866
DNA (291bp) protein (97aa)

This feature has no annotations

sw_7_scaffold_248_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2882..4318)
DNA (1437bp) protein (479aa)
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:EMA41700.1}; EC=1.4.4.2 {ECO:0000313|EMBL:EMA41700.1};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halo
Glycine dehydrogenase subunit 2 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MBB7_9EURY
class V aminotransferase
sw_7_scaffold_248_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4346..5554)
DNA (1209bp) protein (403aa)
glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine dehydrogenase subunit 1 {ECO:0000313|EMBL:AGN01278.1}; EC=1.4.4.2 {ECO:0000313|EMBL:AGN01278.1};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Sali
Glycine dehydrogenase subunit 1 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7X2_9EURY
sw_7_scaffold_248_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5854..6972)
DNA (1119bp) protein (373aa)
Pyrrolo-quinoline quinone n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ73_HALUD
Pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ACV11817.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (st
sw_7_scaffold_248_9
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7489..10761)
DNA (3273bp) protein (1091aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000313|EMBL:ELY79609.1};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxI
Isoleucine--tRNA ligase n=1 Tax=Natrinema gari JCM 14663 RepID=L9YZS5_9EURY
isoleucyl-tRNA synthetase
sw_7_scaffold_248_10
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11179..11658
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A7W7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33227.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_7_scaffold_248_11
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11765..13918
DNA (2154bp) protein (718aa)
Putative acylaminoacyl-peptidase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YSE2_9EURY
Putative acylaminoacyl-peptidase {ECO:0000313|EMBL:ELY77019.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 37
yuxL; acylaminoacyl-peptidase
sw_7_scaffold_248_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13964..14839
DNA (876bp) protein (292aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=79
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJU2_9EURY
sw_7_scaffold_248_13
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14929..16893
DNA (1965bp) protein (655aa)
Cuticular protein PpolCPR146 (Fragment) n=1 Tax=Papilio polytes RepID=I4DQY1_PAPPL
Cmr1 family CRISPR-associated RAMP protein
CRISPR-associated RAMP protein, Cmr1 family {ECO:0000313|EMBL:ACL26651.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;"
sw_7_scaffold_248_14
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16959..17615)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E7X2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71645.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_7_scaffold_248_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17824..18168)
DNA (345bp) protein (115aa)
Ferredoxin I 5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZW8_9EURY
Ferredoxin I 5 {ECO:0000313|EMBL:EMA50843.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ferredoxin
sw_7_scaffold_248_16
haloarchaeon 3A1_DGR, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18256..18522
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U2S1_9EURY
sw_7_scaffold_248_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18967..19701
DNA (735bp) protein (245aa)
septum formation initiator n=1 Tax=Halomicrobium katesii RepID=UPI00035C347D
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACV47411.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_7_scaffold_248_18
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19914..20174
DNA (261bp) protein (87aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Halonotius sp. J07HN4 RepID=U1QJ64_9EURY
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERH06943.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halo
AbrB family transcription regulator
sw_7_scaffold_248_19
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20192..20632
DNA (441bp) protein (147aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1PAB9_9EURY
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ERH06944.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius
nucleic acid-binding protein, contains PIN domain
sw_7_scaffold_248_20
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21005..21340
DNA (336bp) protein (112aa)
Type I site-specific deoxyribonuclease subunit rmeS n=1 Tax=Natrinema gari JCM 14663 RepID=L9YYE3_9EURY
Type I site-specific deoxyribonuclease subunit rmeS {ECO:0000313|EMBL:ELY77938.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrin
restriction modification system DNA specificity domain protein
sw_7_scaffold_248_21
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21337..22488)
DNA (1152bp) protein (384aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPN4_HALUD
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ACV12789.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_7_scaffold_248_22
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22924..23199)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYL0_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59911.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_7_scaffold_248_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23487..23963
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05693.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_7_scaffold_248_24
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24001..24291
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05693.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_7_scaffold_248_25
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24358..24609)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WCT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY47310.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
Displaying 25 items

View Taxonomy