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sw_7_scaffold_288

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_288_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..487
DNA (486bp) protein (162aa)
hypothetical protein; K06940 id=24646468 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10643.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_288_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(552..1244)
DNA (693bp) protein (231aa)
sdr1; short chain dehydrogenase id=24654800 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Short-chain dehydrogenase {ECO:0000313|EMBL:ERG89746.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sdr1; short chain dehydrogenase
sw_7_scaffold_288_3
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1631..3127
DNA (1497bp) protein (499aa)
Phytoene dehydrogenase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JLR0_HALVA
Phytoene dehydrogenase {ECO:0000313|EMBL:EMA10067.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
phytoene dehydrogenase
sw_7_scaffold_288_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3545..4270
DNA (726bp) protein (242aa)
Carbonic anhydrase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VYS6_9EURY
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:AGN02415.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_7_scaffold_288_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4249..4989)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IH34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10004.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_288_6
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5080..6009
DNA (930bp) protein (310aa)
Phosphoesterase PA-phosphatase-related protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XE56_9EURY
Phosphoesterase PA-phosphatase-related protein {ECO:0000313|EMBL:ELY59990.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natr
phosphoesterase PA-phosphatase-like protein
sw_7_scaffold_288_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6441..7172)
DNA (732bp) protein (244aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUK6_NATPD
abc09a1; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI48174.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_7_scaffold_288_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7165..7944)
DNA (780bp) protein (260aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUK5_NATPD
abc09a2; branched chain amino acid ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI48175.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_7_scaffold_288_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7946..9097)
DNA (1152bp) protein (384aa)
ABC-type transport system permease protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUK4_NATPD
abc09p2; branched-chain/neutral amino acids ABC transporter permease
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI48176.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
sw_7_scaffold_288_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9094..10086)
DNA (993bp) protein (331aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VMM0_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELY37478.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Nat
abc09p1; branched-chain/neutral amino acids ABC transporter permease
sw_7_scaffold_288_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10156..11493)
DNA (1338bp) protein (446aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain/neutral amino acids) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUK2_NATPD
abc09s; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 5
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAI48178.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
sw_7_scaffold_288_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11831..12694
DNA (864bp) protein (288aa)
bdhA; D-beta-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:AFK21579.1}; EC=1.1.1.30 {ECO:0000313|EMBL:AFK21579.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI000378250E
sw_7_scaffold_288_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13286..13669)
DNA (384bp) protein (128aa)
glycine cleavage system protein H; K02437 glycine cleavage system H protein id=24644328 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
gcvH; glycine cleavage system H protein
sw_7_scaffold_288_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13666..14739)
DNA (1074bp) protein (358aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; TaxID=272569 spe
Probable aminomethyltransferase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=GCST_HALMA
sw_7_scaffold_288_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14884..16053)
DNA (1170bp) protein (390aa)
Molecular chaperone GroES n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y1B1_9EURY
Molecular chaperone GroES {ECO:0000313|EMBL:ELY67830.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;
alcohol dehydrogenase GroES domain protein
sw_7_scaffold_288_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(16076..16822)
DNA (747bp) protein (249aa)
Polyketide cyclase/dehydrase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XQI8_9EURY
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:ELY63802.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1047
putative integral membrane protein
sw_7_scaffold_288_17
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16919..17038
DNA (120bp) protein (40aa)
Thioredoxin reductase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A4G2_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:GAD52529.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
sw_7_scaffold_288_18
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17077..19275)
DNA (2199bp) protein (733aa)
HTR-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDX2_HALAR
HTR-like protein {ECO:0000313|EMBL:EMA19033.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282
multi-sensor signal transduction histidine kinase
sw_7_scaffold_288_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19454..19810
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D781_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH36647.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_7_scaffold_288_20
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19830..20672)
DNA (843bp) protein (281aa)
TatD-related deoxyribonuclease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXE0_HALVA
TatD-related deoxyribonuclease {ECO:0000313|EMBL:EMA01401.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
TatD-related deoxyribonuclease
sw_7_scaffold_288_21
unknown

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20860..21585
DNA (726bp) protein (242aa)

This feature has no annotations

sw_7_scaffold_288_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21617..22072)
DNA (456bp) protein (152aa)
NYN domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNC8_9EURY
hypothetical protein
NYN domain protein {ECO:0000313|EMBL:ERJ05079.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34602.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
sw_7_scaffold_288_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22391..23458)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR76_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09673.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_288_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23568..24947
DNA (1380bp) protein (460aa)
electron-transferring-flavoprotein dehydrogenase 2 (EC:1.5.5.1)
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IND0_NATPD
FAD-dependent oxidoreductase (Homolog to geranylgeranyl reductase) {ECO:0000313|EMBL:CAI50373.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
sw_7_scaffold_288_25
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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25251..28250
DNA (3000bp) protein (1000aa)
ABC transporter n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UUW3_HALBP
ABC transporter {ECO:0000313|EMBL:ELY28715.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain
ABC transporter
Displaying 25 items

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