ggKbase home page

sw_7_scaffold_337

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_337_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

176..307
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38885.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_337_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

363..533
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTP8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10887.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_337_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

986..2026
DNA (1041bp) protein (347aa)
2-isopropylmalate synthase {ECO:0000313|EMBL:ERH10365.1}; EC=2.3.3.13 {ECO:0000313|EMBL:ERH10365.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
2-isopropylmalate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1P192_9EURY
pyruvate carboxyltransferase
sw_7_scaffold_337_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2426..3103
DNA (678bp) protein (226aa)
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] id=24646187 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
acetolactate synthase large subunit
sw_7_scaffold_337_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3109..4095
DNA (987bp) protein (329aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
Acetolactate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIY1_9EURY
acetolactate synthase large subunit
sw_7_scaffold_337_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4096..4677
DNA (582bp) protein (194aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ERH10367.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ERH10367.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="h
Acetolactate synthase, small subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWV3_9EURY
acetolactate synthase
sw_7_scaffold_337_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4670..5683
DNA (1014bp) protein (338aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] id=24646189 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hyd
ketol-acid reductoisomerase (EC:1.1.1.86)
sw_7_scaffold_337_8
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5676..6134
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BIG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09434.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_7_scaffold_337_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6131..7594
DNA (1464bp) protein (488aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
3-isopropylmalate dehydratase large subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSF8_NATM8
sw_7_scaffold_337_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7671..8324
DNA (654bp) protein (218aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Halorubrum RepID=M0EKZ8_9EURY
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ47079.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_7_scaffold_337_11
unknown

Not on your lists

comp(8447..9052)
DNA (606bp) protein (202aa)

This feature has no annotations

sw_7_scaffold_337_12

Not on your lists

comp(9153..10601)
DNA (1449bp) protein (483aa)
sulfite oxidase (EC:1.8.3.1)
Sulfite oxidase {ECO:0000313|EMBL:AEN04789.1}; EC=1.8.3.1 {ECO:0000313|EMBL:AEN04789.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Sulfite oxidase n=1 Tax=halophilic archaeon DL31 RepID=G2MIK8_9ARCH
sw_7_scaffold_337_13
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10735..11988)
DNA (1254bp) protein (418aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3H5_9EURY
Transposase {ECO:0000313|EMBL:ELY79733.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
transposase
sw_7_scaffold_337_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12209..12682
DNA (474bp) protein (158aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LP73_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
FKBP-type peptidyl-prolyl cis-trans isomerase
sw_7_scaffold_337_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12815..13924
DNA (1110bp) protein (370aa)
mic; mechanosensitive ion channel MscS id=24649121 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ERH11244.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
mic; mechanosensitive ion channel MscS
sw_7_scaffold_337_16
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13977..14252
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IA83_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB15644.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_7_scaffold_337_17
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14249..14680
DNA (432bp) protein (144aa)
Homolog to endonuclease VapC n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMA5_HALWC
homolog to endonuclease VapC
Homolog to endonuclease VapC {ECO:0000313|EMBL:CCC41225.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (s
sw_7_scaffold_337_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14805..15215)
DNA (411bp) protein (137aa)
CBS domain containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNZ9_9EURY
CBS domain containing protein {ECO:0000313|EMBL:ELZ23584.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
signal transduction protein with CBS domains
sw_7_scaffold_337_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15334..16314
DNA (981bp) protein (327aa)
3-isopropylmalate dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMJ2_9EURY
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ELZ23607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
3-isopropylmalate dehydrogenase
sw_7_scaffold_337_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16431..18293
DNA (1863bp) protein (621aa)
acyl-CoA dehydrogenase id=24648801 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERH09934.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
acyl-CoA dehydrogenase domain-containing protein
sw_7_scaffold_337_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18318..18977
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeo
phosphodiesterase, MJ0936 family id=24647890 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
putative phosphoesterase
sw_7_scaffold_337_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19260..20441)
DNA (1182bp) protein (394aa)
lysC; aspartate kinase (EC:2.7.2.4) id=24644805 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
aspartate kinase (EC:2.7.2.4)
sw_7_scaffold_337_23
unknown

Not on your lists

comp(20432..20731)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_7_scaffold_337_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20820..21206
DNA (387bp) protein (129aa)
hypothetical protein id=24649621 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10711.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_337_25
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21291..22292)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZYV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY90782.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_7_scaffold_337_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22441..22605)
DNA (165bp) protein (55aa)
DNA polymerase II (EC:2.7.7.7)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=662476 species="Archaea; Euryar
DNA polymerase II large subunit n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J3J8_HALVA
Displaying 26 items

View Taxonomy