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sw_7_scaffold_392

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_392_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..949)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JAN7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA06182.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
sw_7_scaffold_392_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1040..2512)
DNA (1473bp) protein (491aa)
Protein translocase subunit SecY n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLJ6_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=108502
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
sw_7_scaffold_392_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2514..2957)
DNA (444bp) protein (148aa)
50S ribosomal protein L15P n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV69_HALUD
rpl15p; 50S ribosomal protein L15P
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_7_scaffold_392_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2957..3421)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYE1_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rpl30; 50S ribosomal protein L30
sw_7_scaffold_392_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3418..3957)
DNA (540bp) protein (180aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=24646826 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
SSU ribosomal protein S5P {ECO:0000313|EMBL:ERH10991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps5p; 30S ribosomal protein S5P
sw_7_scaffold_392_6
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3954..4514)
DNA (561bp) protein (187aa)
50S ribosomal protein L18P n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=RL18_HALMA
rpl18p; 50S ribosomal protein L18
50S ribosomal protein L18; Hl12; Hmal18; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43049
sw_7_scaffold_392_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4514..4960)
DNA (447bp) protein (149aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
rpl19e; 50S ribosomal protein L19
sw_7_scaffold_392_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4957..5985)
DNA (1029bp) protein (343aa)
Ribosomal protein L32e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV64_HALUD
50S ribosomal protein L32e
Ribosomal protein L32e {ECO:0000313|EMBL:ACV12476.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strai
sw_7_scaffold_392_9
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5985..6557)
DNA (573bp) protein (191aa)
50S ribosomal protein L6 n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=RL6_HALMA
rpl6p; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
sw_7_scaffold_392_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6560..6952)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D5_HALMD
rps8p; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
sw_7_scaffold_392_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6949..7128)
DNA (180bp) protein (60aa)
30S ribosomal protein S14 type Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIM3_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
rps14P; 30S ribosomal protein S14P
sw_7_scaffold_392_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7125..7652)
DNA (528bp) protein (176aa)
50S ribosomal protein L5 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MMW8_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens
50S ribosomal protein L5
sw_7_scaffold_392_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7649..8416)
DNA (768bp) protein (256aa)
30S ribosomal protein S4e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL88_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps4e; 30S ribosomal protein S4e
sw_7_scaffold_392_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8409..8702)
DNA (294bp) protein (98aa)
50S ribosomal protein L24P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI8_9EURY
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpl24p; 50S ribosomal protein L24
sw_7_scaffold_392_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8768..9166)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN3_9EURY
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl14; 50S ribosomal protein L14
sw_7_scaffold_392_16
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9166..9558)
DNA (393bp) protein (131aa)
30S ribosomal protein S17P n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X184_9EURY
ribosomal protein S17P
Ribosomal protein S17P {ECO:0000313|EMBL:AFO57304.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_7_scaffold_392_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9549..9836)
DNA (288bp) protein (96aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P n=1 Tax=Halomicrobium katesii RepID=UPI00037B98D9
ribonuclease P, Rpp29
sw_7_scaffold_392_18
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9837..10073)
DNA (237bp) protein (79aa)
50S ribosomal protein L29P n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8X8_9EURY
50S ribosomal protein L29P
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
sw_7_scaffold_392_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10070..11146)
DNA (1077bp) protein (359aa)
30S ribosomal protein S3 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4C6_HALMD
rps3p; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
sw_7_scaffold_392_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11146..11607)
DNA (462bp) protein (154aa)
50S ribosomal protein L22 n=1 Tax=Halomicrobium katesii RepID=UPI000361BABD
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium
sw_7_scaffold_392_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11610..12032)
DNA (423bp) protein (141aa)
30S ribosomal protein S19 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS19_NATPD
rps19p; 30S ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_7_scaffold_392_22
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12029..12751)
DNA (723bp) protein (241aa)
50S ribosomal protein L2 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WY13_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
rpl2p; 50S ribosomal protein L2
sw_7_scaffold_392_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12754..13008)
DNA (255bp) protein (85aa)
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24649899 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rplW; 50S ribosomal protein L23
sw_7_scaffold_392_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13008..13748)
DNA (741bp) protein (247aa)
50S ribosomal protein L4; K02930 large subunit ribosomal protein L4e id=24646812 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
50S ribosomal protein L4
sw_7_scaffold_392_25
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13751..14767)
DNA (1017bp) protein (339aa)
50S ribosomal protein L3 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBJ2_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rplC; 50S ribosomal protein L3P
sw_7_scaffold_392_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14774..15625)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4B9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47941.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_392_27
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15749..16363)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIP6_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA20793.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_7_scaffold_392_trna_1
unknown

Not on your lists

16520..16590
DNA (71bp)
transferRNA
sw_7_scaffold_392_28
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17220..18608)
DNA (1389bp) protein (463aa)
ATPase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L440_9EURY
ATPase {ECO:0000313|EMBL:EMA27204.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
putative ATPase (AAA+ superfamily)
Displaying 29 items

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