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sw_7_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_42_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(155..1456)
DNA (1302bp) protein (434aa)
Aspartate--tRNA ligase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1Q9_HALMD
aspC; aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ACV49149.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_7_scaffold_42_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2673..2855
DNA (183bp) protein (61aa)
ArcR family transcription regulator n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIP7_HALJP
ArcR family transcription regulator {ECO:0000313|EMBL:EMA33487.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
transcriptional regulator
sw_7_scaffold_42_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2895..3923)
DNA (1029bp) protein (343aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEP2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase 2 {ECO:0000313|EMBL:CQR52052.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
4-hydroxythreonine-4-phosphate dehydrogenase
sw_7_scaffold_42_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4039..5424)
DNA (1386bp) protein (462aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KIR2_HALAR
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA20049.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sugar ABC transporter ATP-binding protein
sw_7_scaffold_42_5

Not on your lists

comp(5490..6395)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000371250E
Uncharacterized protein {ECO:0000313|EMBL:KKK54676.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
binding-protein-dependent transport systems inner membrane component
sw_7_scaffold_42_6
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6385..7311)
DNA (927bp) protein (309aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T8D1_MYCVP
binding-protein-dependent transport systems inner membrane component
ABC transporter permease {ECO:0000313|EMBL:KGI70837.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
sw_7_scaffold_42_7
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7315..8757)
DNA (1443bp) protein (481aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Citreicella sp. SE45 RepID=D0D8D1_9RHOB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL36040.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846
extracellular solute-binding protein
sw_7_scaffold_42_8
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8823..10115)
DNA (1293bp) protein (431aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
sw_7_scaffold_42_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10176..11627)
DNA (1452bp) protein (484aa)
Carbohydrate kinase, FGGY n=2 Tax=Saccharopolyspora erythraea RepID=A4F8A8_SACEN
Pentulose/hexulose kinase {ECO:0000313|EMBL:EXG79318.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;
carbohydrate kinase
sw_7_scaffold_42_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11752..13140)
DNA (1389bp) protein (463aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HE88_9EURY
sw_7_scaffold_42_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13297..14919
DNA (1623bp) protein (541aa)
dihydrolipoamide S-acyltransferase (EC:2.3.1.-)
Dihydrolipoamide S-acyltransferase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QVV7_9EURY
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:EFW91370.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
sw_7_scaffold_42_12
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14984..15994
DNA (1011bp) protein (337aa)
Dehydrogenase E1 component n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WU64_9EURY
Dehydrogenase E1 component {ECO:0000313|EMBL:ELY52751.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM
dehydrogenase E1 component
sw_7_scaffold_42_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15991..16983
DNA (993bp) protein (331aa)
Transketolase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LPX9_9EURY
Transketolase {ECO:0000313|EMBL:EMA35627.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
transketolase
sw_7_scaffold_42_14
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17446..18207
DNA (762bp) protein (254aa)
ArcR family transcription regulator n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G028_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ65651.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
arcR3; ArcR family transcription regulator
sw_7_scaffold_42_15
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18426..19874
DNA (1449bp) protein (483aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGH5_9EURY
Autoinducer 2 kinase LsrK {ECO:0000313|EMBL:CQR48672.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_7_scaffold_42_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19927..20538
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIM9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02950.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_7_scaffold_42_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20661..22604
DNA (1944bp) protein (648aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWG3_HALBP
Chromosome segregation protein (Spc25, Csm1, Pcs1)
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ADQ69383.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
sw_7_scaffold_42_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22644..23684)
DNA (1041bp) protein (347aa)
Oxidoreductase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT51_HALVA
Oxidoreductase {ECO:0000313|EMBL:EMA11528.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
tas; oxidoreductase
sw_7_scaffold_42_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23917..24384)
DNA (468bp) protein (156aa)
Transposase ISHwa16_A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCX3_9EURY
Transposase ISHwa16_A {ECO:0000313|EMBL:EMA54939.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
ISSod10-type transposase ISHwa16
sw_7_scaffold_42_20
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24507..28601)
DNA (4095bp) protein (1365aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227494 species="Archaea; Euryarchae
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZVI9_9EURY
sw_7_scaffold_42_21
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28682..29725
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IV74_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA00616.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_42_22
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29822..30610)
DNA (789bp) protein (263aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ13_HALVA
Methyltransferase {ECO:0000313|EMBL:EMA00690.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715
sw_7_scaffold_42_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30642..32120)
DNA (1479bp) protein (493aa)
aspartyl-tRNA(Asn) amidotransferase subunit B / alutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.- 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNB6_9EURY
sw_7_scaffold_42_24
unknown

Not on your lists

32155..33228
DNA (1074bp) protein (358aa)

This feature has no annotations

sw_7_scaffold_42_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33341..34546
DNA (1206bp) protein (402aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR0_HALMD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV48270.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_7_scaffold_42_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34730..36625
DNA (1896bp) protein (632aa)
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1QXN8_9EURY
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:ERH10692.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_7_scaffold_42_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36642..37580
DNA (939bp) protein (313aa)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJP4_9EURY
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:ERH10691.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
sw_7_scaffold_42_28
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37712..38140
DNA (429bp) protein (143aa)
HTH-type transcriptional regulator Ptr2 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUB6_9EURY
HTH-type transcriptional regulator Ptr2 {ECO:0000313|EMBL:GAD52312.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
transcription regulator
sw_7_scaffold_42_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38213..39877
DNA (1665bp) protein (555aa)
Phosphoesterase RecJ domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR6_HALMD
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ACV48276.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_7_scaffold_42_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39916..40713
DNA (798bp) protein (266aa)
CBS domain-containing IMP dehydrogenase/putative signal transduction protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL3_9EURY
CBS domain-containing IMP dehydrogenase/putative signal transduction protein {ECO:0000313|EMBL:ELZ21773.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
signal transduction protein with CBS domains
Displaying items 1-30 of 76 in total

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