ggKbase home page

sw_7_scaffold_518

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_518_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(311..625)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 PF69_9EURY">RepID=U1PF69_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09021.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_7_scaffold_518_2
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1082..1795
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY48476.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_7_scaffold_518_3
unknown

Not on your lists

comp(1789..2346)
DNA (558bp) protein (186aa)

This feature has no annotations

sw_7_scaffold_518_4
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2508..2975
DNA (468bp) protein (156aa)
Putative membrane protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AC24_NATGS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ71453.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY66755.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
sw_7_scaffold_518_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3005..4432)
DNA (1428bp) protein (476aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
sw_7_scaffold_518_6
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5184..5792
DNA (609bp) protein (203aa)
Transcription factor TFIIB cyclin-related protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WBQ8_9EURY
Transcription factor TFIIB cyclin-related protein {ECO:0000313|EMBL:ELY46797.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natr
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_7_scaffold_518_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6102..8411)
DNA (2310bp) protein (770aa)
Uncharacterized protein n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T211_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD07620.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_7_scaffold_518_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8577..9101
DNA (525bp) protein (175aa)
NUDIX hydrolase id=24655575 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:ERG89014.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
mutT5; Mut/nudix family protein
sw_7_scaffold_518_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9379..10476
DNA (1098bp) protein (366aa)
Ribonuclease BN n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLD2_9EURY
Ribonuclease BN {ECO:0000313|EMBL:ELZ22694.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
hypothetical protein
sw_7_scaffold_518_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10805..12847)
DNA (2043bp) protein (681aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5) id=24648628 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
carbamoyl phosphate synthase large subunit
sw_7_scaffold_518_11
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13597..14463)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RAR1_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA59130.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
sw_7_scaffold_518_trna_1
unknown

Not on your lists

comp(14593..14667)
DNA (75bp)
transferRNA
sw_7_scaffold_518_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14901..15779
DNA (879bp) protein (293aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halot
Protease HtpX homolog n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C0K7_9EURY
Zn-dependent protease with chaperone function
sw_7_scaffold_518_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15835..16014)
DNA (180bp) protein (60aa)
Zn-dependent protease {ECO:0000313|EMBL:ERG93118.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.
peptidase M50
sw_7_scaffold_518_14
unknown

Not on your lists

16122..16274
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_518_15
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16399..16827
DNA (429bp) protein (143aa)
UspA domain-containing protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WXF6_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELY53018.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali
universal stress protein UspA-like protein
sw_7_scaffold_518_16
unknown

Not on your lists

16885..17106
DNA (222bp) protein (74aa)

This feature has no annotations

sw_7_scaffold_518_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17246..17656
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0I0A2_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM59323.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_7_scaffold_518_18
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17757..18050
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALI6_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ74052.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_7_scaffold_518_19
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18278..20053)
DNA (1776bp) protein (592aa)
Choline/carnitine/betaine transport n=2 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AJH5_NATGS
choline/carnitine/betaine transport
Choline/carnitine/betaine transport {ECO:0000313|EMBL:AFZ74048.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium
sw_7_scaffold_518_20
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20384..20677)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALI0_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ74047.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_7_scaffold_518_21
unknown

Not on your lists

comp(20778..20957)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_7_scaffold_518_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21117..21527
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_7_scaffold_518_23
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21340..23865)
DNA (2526bp) protein (842aa)
Dihydropteroate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMA9_HALVA
Dihydropteroate synthase {ECO:0000313|EMBL:EMA08820.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATC
dihydropteroate synthase
sw_7_scaffold_518_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24076..25803
DNA (1728bp) protein (576aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1227453 sp
fhs; formyltetrahydrofolate synthetase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L721_HALJP
sw_7_scaffold_518_25
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25820..26200)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J9C2_HALVA
Endoribonuclease L-PSP {ECO:0000313|EMBL:EMA05571.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
endoribonuclease L-PSP
sw_7_scaffold_518_26
unknown

Not on your lists

comp(26245..26400)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_7_scaffold_518_27
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26455..27681
DNA (1227bp) protein (409aa)
Potassium channel-like protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0QT90_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA10766.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensi
pch1; potassium channel-like
sw_7_scaffold_518_28
unknown

Not on your lists

27741..28889
DNA (1149bp) protein (383aa)

This feature has no annotations

sw_7_scaffold_518_29
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29167..31023
DNA (1857bp) protein (619aa)
Glycine betaine transporter BetL n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JC36_HALVA
Glycine betaine transporter BetL {ECO:0000313|EMBL:EMA05574.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
glycine/betaine ABC transporter
Displaying items 1-30 of 48 in total

View Taxonomy