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sw_7_scaffold_83

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_83_1
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(460..1851)
DNA (1392bp) protein (464aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K7M3_THENN
sugar ABC transporter periplasmic sugar-binding protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Extracellular solute-binding protein, family 1 precursor
sw_7_scaffold_83_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1989..2993)
DNA (1005bp) protein (335aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
malate dehydrogenase
sw_7_scaffold_83_3
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3002..4165)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
carbohydrate hydrolase
sw_7_scaffold_83_4
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4176..4490)
DNA (315bp) protein (105aa)
UxaA family hydrolase n=2 Tax=Paenibacillus mucilaginosus RepID=F8FCT2_PAEMK
UxaA family hydrolase
D-galactarate dehydratase {ECO:0000313|EMBL:AFH60514.1}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
sw_7_scaffold_83_5
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4738..5754)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CJR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22124.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_7_scaffold_83_6
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6504..7463
DNA (960bp) protein (320aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T700_THEIA
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
binding-protein-dependent transporters inner membrane component
sw_7_scaffold_83_7
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

7465..8331
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
ABC-type sugar transport system, permease component
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
sw_7_scaffold_83_8

Not on your lists

comp(8486..9454)
DNA (969bp) protein (323aa)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
3-phosphoglycerate dehydrogenase
sw_7_scaffold_83_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9675..10934)
DNA (1260bp) protein (420aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PMT7_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA70050.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
mandelate racemase/muconate lactonizing protein
sw_7_scaffold_83_10
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11018..13375
DNA (2358bp) protein (786aa)
alpha-glucosidase (EC:3.2.1.-)
Alpha-glucosidase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PJ16_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:EMA69933.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_7_scaffold_83_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13589..14719
DNA (1131bp) protein (377aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
sw_7_scaffold_83_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14970..15782
DNA (813bp) protein (271aa)
Protein GrpE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR18_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
molecular chaperone GrpE
sw_7_scaffold_83_13
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15935..17896
DNA (1962bp) protein (654aa)
Chaperone protein DnaK n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLM7_HALAR
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
sw_7_scaffold_83_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17909..18280
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CS72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26051.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_7_scaffold_83_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18604..19641
DNA (1038bp) protein (346aa)
Cobalamin-independent synthase MetE domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZK6_HALMD
Cobalamin-independent synthase MetE domain-containing protein
Cobalamin-independent synthase MetE domain protein {ECO:0000313|EMBL:ACV48774.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
sw_7_scaffold_83_16
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19638..20699
DNA (1062bp) protein (354aa)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288, ECO:0000313|EMBL:ELY66827.1}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; Tax
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XZB8_9EURY
sw_7_scaffold_83_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20923..21648)
DNA (726bp) protein (242aa)
RNA-associated protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLK5_9EURY
RNA-associated protein {ECO:0000313|EMBL:ELZ24126.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA-associated protein
sw_7_scaffold_83_18
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21738..22499)
DNA (762bp) protein (254aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=2 Tax=Haloarcula hispanica RepID=G0HTX1_HALHT
proteasome subunit alpha
sw_7_scaffold_83_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22502..22981)
DNA (480bp) protein (160aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
RNase P/RNase MRP subunit POP5 (EC:3.1.26.5)
Ribonuclease P protein component 2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQH0_9EURY
sw_7_scaffold_83_20
unknown

Not on your lists

comp(22978..23130)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_83_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23423..23812
DNA (390bp) protein (130aa)
Conserved hypothetical membrane protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIN5_9EURY
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CCQ34769.1}; Integral membrane sensor signal transduction histidine kinase protein {ECO:0000313|EMBL:ERJ06998.1}; TaxID=1033806 species="Archa
sw_7_scaffold_83_22
unknown

Not on your lists

23809..24225
DNA (417bp) protein (139aa)

This feature has no annotations

sw_7_scaffold_83_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24266..25378)
DNA (1113bp) protein (371aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1085028 species=
carboxylate-amine ligase, YbdK family id=24647752 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
carboxylate-amine ligase, YbdK family
sw_7_scaffold_83_24
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25728..26501
DNA (774bp) protein (258aa)
ABC transporter n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WUS8_9EURY
ABC transporter {ECO:0000313|EMBL:ELY52951.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JC
ABC transporter-like protein
sw_7_scaffold_83_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26546..28210)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ALF0_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ74718.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_7_scaffold_83_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28402..29130)
DNA (729bp) protein (243aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|H
ribonuclease P protein component 3 (EC:3.1.26.5)
Ribonuclease P protein component 3 n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLG6_9EURY
sw_7_scaffold_83_27
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29131..29613)
DNA (483bp) protein (161aa)
hypothetical protein; K07581 hypothetical protein id=24642317 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Putative exosome subunit {ECO:0000313|EMBL:ERH12273.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_7_scaffold_83_28
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29567..29791)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 PF74_9EURY">RepID=M0PF74_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68777.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_7_scaffold_83_29
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29860..30873)
DNA (1014bp) protein (338aa)
Phosphate uptake regulator n=1 Tax=halophilic archaeon J07HX5 RepID=U1P5Y7_9EURY
Phosphate uptake regulator {ECO:0000313|EMBL:ERG88952.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
abc15r_2; ABC transporter
sw_7_scaffold_83_30
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30875..31381)
DNA (507bp) protein (169aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MJL9_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
phoU2; phosphate transport system regulatory protein PhoU
Displaying 30 items

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