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sw_7_scaffold_965

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_965_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1124
DNA (1122bp) protein (374aa)
geranylgeranyl reductase id=24647229 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Geranylgeranyl reductase family {ECO:0000313|EMBL:ERH08375.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
geranylgeranyl reductase
sw_7_scaffold_965_2
unknown

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1121..1375
DNA (255bp) protein (85aa)

This feature has no annotations

sw_7_scaffold_965_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1369..2103)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25057.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_965_4
unknown

Not on your lists

2204..2632
DNA (429bp) protein (143aa)

This feature has no annotations

sw_7_scaffold_965_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2783..3313)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J649_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15767.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_965_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3569..4645)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3XXL4_BRAFL
Uncharacterized protein {ECO:0000313|EMBL:EZX15924.1}; Flags: Fragment;; TaxID=1413510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus C0673.;"
Collagen domain protein
sw_7_scaffold_965_7
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4731..5480)
DNA (750bp) protein (250aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1227464 species="Archaea; Euryarchaeota; H
Isopentenyl phosphate kinase n=3 Tax=Haloferax RepID=M0F491_9EURY
isopentenyl phosphate kinase
sw_7_scaffold_965_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5482..6465)
DNA (984bp) protein (328aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=51
Mevalonate kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTM3_HALUD
mevalonate kinase
sw_7_scaffold_965_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6559..6978
DNA (420bp) protein (140aa)
Cobalamin B12-binding domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRC2_9EURY
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:EFW92541.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
methylmalonyl-CoA mutase
sw_7_scaffold_965_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6983..8107
DNA (1125bp) protein (375aa)
ArgK-type transport ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ7_NATPD
argK; transport ATPase, component for LAO/AO transport systems
YgfD family GTPase {ECO:0000313|EMBL:CAI49447.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_7_scaffold_965_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8248..9183
DNA (936bp) protein (312aa)
alpha/beta hydrolase fold protein id=24648924 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative hydrolase or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ERH10057.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophi
hypothetical protein
sw_7_scaffold_965_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9478..9885)
DNA (408bp) protein (136aa)
Transcription elongation factor NusA n=3 Tax=Haloarcula RepID=V5TRC4_HALHI
transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source=
sw_7_scaffold_965_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9882..12545)
DNA (2664bp) protein (888aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
sw_7_scaffold_965_14
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(12545..16744)
DNA (4200bp) protein (1400aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococca
DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDK8_METVM
DNA-directed RNA polymerase subunit A'
sw_7_scaffold_965_15
Halobacteriaceae archaeon R28, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16741..18567)
DNA (1827bp) protein (609aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=869890 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halobacteriaceae archaeon R28 RepID=V5QQF9_9EURY
sw_7_scaffold_965_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18569..18787)
DNA (219bp) protein (73aa)
RNA polymerase beta subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI8_HALMD
DNA-directed RNA polymerase subunit beta''
RNA polymerase beta subunit {ECO:0000313|EMBL:ACV46649.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
Displaying 16 items

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