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sw_7_scaffold_4839

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_4839_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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101..784
-----------------
DNA (684bp)
protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=348780 species="
Endonuclease III n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ING4_NATPD
repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site) lyase
sw_7_scaffold_4839_2
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1098..1481
-----------------
DNA (384bp)
protein (128aa)
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ17938.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena sa
transcription regulator
sw_7_scaffold_4839_3
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1569..2801
-----------------
DNA (1233bp)
protein (411aa)
Sodium/hydrogen exchanger n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A2Y9_9EURY
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ELY92232.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
sodium/hydrogen exchanger
sw_7_scaffold_4839_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3299..3796)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46164.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_4839_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3958..4893)
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U0L2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48843.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_7_scaffold_4839_6
unknown

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5788..5976
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

sw_7_scaffold_4839_7
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6091..6702
-----------------
DNA (612bp)
protein (204aa)
Halocyanin-like protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R2S6_HALMT
petE; halocyanin precursor-like protein
Halocyanin {ECO:0000313|EMBL:AHZ22084.1}; Halocyanin-like protein {ECO:0000313|EMBL:AFK18536.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
sw_7_scaffold_4839_8
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6705..7100
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Z0_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15607.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_4839_9

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7577..7843
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJ23_9EURY
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:ESS04184.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
petA; menaquinol--cytochrome-c reductase
sw_7_scaffold_4839_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7846..8655
-----------------
DNA (810bp)
protein (270aa)
Cytochrome b6 n=3 Tax=Haloarcula RepID=G0HQJ7_HALHT
petB1; cytochrome b6
Cytochrome b6 {ECO:0000313|EMBL:AEM56993.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 3396
sw_7_scaffold_4839_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8660..9520
-----------------
DNA (861bp)
protein (287aa)
petD; cytochrome bc1 complex cytochrome b/c subunit (EC:1.10.2.-)
Cytochrome b(C-terminal)/b6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRD3_9EURY
Cytochrome b(C-terminal)/b6 {ECO:0000313|EMBL:ELZ25786.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
sw_7_scaffold_4839_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9572..9976
-----------------
DNA (405bp)
protein (135aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25787.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_4839_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9969..10241
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VWE6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15602.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_4839_14
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10320..10505)
-----------------
DNA (186bp)
protein (62aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HSR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86742.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
Displaying 14 items

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